Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g00203 ATGAAGAATAAGGAGCAACAAGGCAAAGGTGAAGGCTCATATCTGAAACACTTTTTTGCTCAACTAGACCTTCTCAACTTCTTTGCTCATGCTCTAGTTTTTGGCATTGGTTTACTCATTGGGATCACTCTCACTTTCTTTGTTAACAACTTCTCCTTCATCAACTTTCAAATCCAACAATTCTCCCTTCCGTCAAATTCCCTCAAACCACCACCTTTCTCTCCAATCTCCTCCAACATCTCATTACCGATATCAGACAGCCAACCCAAAAATGAATCTCAGTATTTTGAAGGATTAGTACAAAACAATACCTCATCTTCACCCCAGAAAGATAACCAAACCCTACCTTCTTCCAATTCCTCCTCGGTCAGCAATACAAGGGTGATGAACTTCACCAGAATTGGGTTGAGTGAATTCTTGAAGCCCCCTGTGGCCATGCATGATATGAGTGATGAAGAGTTGTTGTGGAAAGCCTCCATGGTTCCCTTGATTCACAAACTCCCATTCAAACAGACTCCAAAGGTTGCATTCATGTTTCTGACAAAAGGTCCTGTGCTGTTGGCTCCTCTGTGGGAGAGATTCTTCAAAGGAAATGAAGGGTTGTATTCTATCTATGTCCATTCCCACCCTTCTTTCAATGAAACAGTGCCTGAAAGCTCTGTGTTTCATGGCCGCAATATCCCCAGCAAGGAAGTGAGGTGGGGTGAGAACAGCATGATAGAGGCAGAGAGAAGGCTATTAGGCAATGCACTCCTTGATTTCTCCAACCAACGTTTTGTACTGCTCTCAGAGGCATGCATCCCTTTGTTCAACTTCTCCACCATCTACACTTATCTCATGAACTCAACCAAGACCTTTGTGGAGGCCTATGATAAGCCAGGGGAAGTGGGCCGTGGGAGATACAGGCCCAGAATGAGGCCCCAAATTAGACTCTCCCAATGGAGAAAAGGGTCCCAATGGTTCCAAATAGACCGTTTTCTTGCCCTTCAAATAGTCTCTGACTACCACTACTTCCCAGTGTTCACAAAGTACTGCAACCCTAATTGCTACAGTGATGAACACTACTTGCCCACATTTGTTAGCATAAAATTTTGGAAGAGGAACTCTAACAGGACCTTGACGTGGGTTGATTGGGCAAAGGGTGGTGCTCATCCTTCAAGGTATTACAGAAATGATGTGACAGTTGAGTTTTTGAACAAGTTGAGGTTTGGAACATCATGTGACTACAATGGACACACCACCAATATTTGTCATTTGTTTGCAAGGAAATTCACCACTCATGCTTTGGATAGATTGCTCAGATTTGCTCCAAAGCTCATGCACTTCAATTGA 1332 0.4354 MKNKEQQGKGEGSYLKHFFAQLDLLNFFAHALVFGIGLLIGITLTFFVNNFSFINFQIQQFSLPSNSLKPPPFSPISSNISLPISDSQPKNESQYFEGLVQNNTSSSPQKDNQTLPSSNSSSVSNTRVMNFTRIGLSEFLKPPVAMHDMSDEELLWKASMVPLIHKLPFKQTPKVAFMFLTKGPVLLAPLWERFFKGNEGLYSIYVHSHPSFNETVPESSVFHGRNIPSKEVRWGENSMIEAERRLLGNALLDFSNQRFVLLSEACIPLFNFSTIYTYLMNSTKTFVEAYDKPGEVGRGRYRPRMRPQIRLSQWRKGSQWFQIDRFLALQIVSDYHYFPVFTKYCNPNCYSDEHYLPTFVSIKFWKRNSNRTLTWVDWAKGGAHPSRYYRNDVTVEFLNKLRFGTSCDYNGHTTNICHLFARKFTTHALDRLLRFAPKLMHFN* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g00203 443 Pfam Core-2/I-Branching enzyme 175 401 IPR003406 GO:0016020|GO:0016757
Lapu4g00203 443 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 125 433 IPR044174 GO:0016757
Lapu4g00203 443 MobiDBLite consensus disorder prediction 101 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g00203 Lapu-Chr4 2014533 2017961 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g00203 - - gmx:100791882 721.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu4g00203 4 2014533 2017961 Lapu4g00203 4 2014533 2017961 ECH