Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g00182 ATGAGCAGTGGAACCGGAGCAAACATGGTTCGGCGCAAGCGTTGCAGGCATTCACCGGAAAATTCTTCGTCAAAACGAAGAAGACGTTCTCAGTTTGAATGTCGGAGTAGGAGATGGGTTGTCTCTTCCGAAGACTCTTCCAATTGCACGGATAAGATTGTGGTTGTTTCATACAATATACTTGGCGTTGAAAATGCATCAAATCATCTGGATTTGTATTCTAATATTCCACGTAGGTTCTTGGAGTGGAACAGGCGGAAAAGGCTCATACTTGAAGAGATTAATAACTATAACGCCAGCATACTGTGTTTCCAGGAGGTTGATCATTTTAATGATCTAGACAATCTTTTCCAGGATAGTGGCTTTAAAGGTATTTACAAGGCTCGCACTGGGGAAGCACAAGATGGATGTGCTGTATTTTGGAAAGACAAGTTATTCAACCTTTTGCATCAAGAAGATATAGAGTTCCAAAGATTTGGCATGCGTAACAATGTTGCCCAGCTGTGTATTTTGGAGGCAAACCATGATAAAAAAGAATCTGACGCATGTAACCTAACAACAACGGAACCATCCACAGGAAAACGAAGATTTGTTATAGGAAACATACATGTGCTGTTCAACCCAAATCGTGGTGACATCAAACTGGGCCAGGTCAGAATTTTACTTGATAAAGCTTACAAGTTGTCACAAGAATGGGGCAACATCCCCGTTATTATTGCGGGGGATTTAAATAGTGTTCCGCAGAGTGCCATATACAAGTTTCTGTCTTCATCAAAGTTAGACATCCAATTACATGATCGCCGAAATATGTCAGGACAGCTTGAAATCCAGACCAACAGAGTCTGCAGATCACATTTTTCTGATGATGCAAGCATTTCGATGACTCTTTCGAGGCAATTGCTATATAGATGGAGTGTGGATGAACTACGACTTGCAACAGGGGCAAAAGGAATCACTCATCTTCAACACCAGCTCAAACTCCGCAGTGCTTATAGTGGTGTTCCTGGAAACCATAGAACAAGAGATGCTATTGGGGAGCCCTTGGCAACATCATACCACTCCAAGTTCATGGGAACAGTCGATTATATCTGGCATTCTGATGATCTTGTTCCACTTAGAGTTCTCGAAACCTTGCCAATTGATATCCTTAGAAGATCTGGAGGACTCCCTAGTGAGAAATGGGGAAGCGATCACCTAGCTGTTGTGTGTGAATTGGCTTTTAGCAAACAACAGCAATGTATGAGGTCTGAACCTTAA 1257 0.4216 MSSGTGANMVRRKRCRHSPENSSSKRRRRSQFECRSRRWVVSSEDSSNCTDKIVVVSYNILGVENASNHLDLYSNIPRRFLEWNRRKRLILEEINNYNASILCFQEVDHFNDLDNLFQDSGFKGIYKARTGEAQDGCAVFWKDKLFNLLHQEDIEFQRFGMRNNVAQLCILEANHDKKESDACNLTTTEPSTGKRRFVIGNIHVLFNPNRGDIKLGQVRILLDKAYKLSQEWGNIPVIIAGDLNSVPQSAIYKFLSSSKLDIQLHDRRNMSGQLEIQTNRVCRSHFSDDASISMTLSRQLLYRWSVDELRLATGAKGITHLQHQLKLRSAYSGVPGNHRTRDAIGEPLATSYHSKFMGTVDYIWHSDDLVPLRVLETLPIDILRRSGGLPSEKWGSDHLAVVCELAFSKQQQCMRSEP* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g00182 418 MobiDBLite consensus disorder prediction 1 29 - -
Lapu4g00182 418 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 13 407 - -
Lapu4g00182 418 Pfam Endonuclease/Exonuclease/phosphatase family 56 398 IPR005135 GO:0003824
Lapu4g00182 418 Gene3D Endonuclease/exonuclease/phosphatase 26 417 IPR036691 -
Lapu4g00182 418 SUPERFAMILY DNase I-like 52 406 IPR036691 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g00182 83 257 EF-hand Containing Proteins AT5G54130 27.174 3.63e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g00182 - - vra:106769764 719.539
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu4g00182 4 1823873 1831691 Lapu4g00182 4 1823873 1831691 ECH