Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03946 ATGGGCTCAATGCTCATGCCTCTCACATCACTGCCACTGCTCATTCTACTCTCCACCCTCTCACCGCTCAAAGTTTCAGCTACGGCATCATTCATACTCTACAACAAGTGTCCCTACCCAGTGTGGCCCGGGATCCAGCCCAGCGCTGGAAAGCCCATTCTCGCCCGCGGAGGCTTCAAGCTCGCTCCCAACCGGGCCTACTCCCTCCAACTCCCGGCGCTCTGGTCAGGCCGCTTCTGGGGCCGCCACGGCTGCGCCTTCGACGCCTCCGGCCGCGGGCGCTGCGCCACGGGCGACTGCGGCGGGTCCCTCTACTGCAACGGCATCGGCGGCACCCCGCCGGCCACCCTGGCGGAGTTCACTCTGGGCAACGAGCAGGACTTCTACGACGTGAGCCTGGTGGACGGCTACAACCTGCCCATCTCCATTACCCCCTTTAAGGGATCCGGAAAATGCAGCTACGCCGGCTGCGTGAGCGACCTCAACACCATGTGCCCCGTCGGCCTGCAGGTGCGTTCACACGACAACAAGCGCGTGGTGGCCTGCAAGAGCGCTTGCTCCGCCTTCAACTCCCCCAAGTACTGCTGCACCGGCTCCTACGGAAGCCCACAGGCCTGCAAGCCCACCGTTTATTCCAAGATCTTCAAGACCGCATGCCCCAAGGCCTACTCCTACGCCTACGATGACCCCACCAGCATCGCCACTTGCACCAAAGCTAACTATTTGCTCACTTTCTGCCCTCATCGCCACTGA 753 0.6242 MGSMLMPLTSLPLLILLSTLSPLKVSATASFILYNKCPYPVWPGIQPSAGKPILARGGFKLAPNRAYSLQLPALWSGRFWGRHGCAFDASGRGRCATGDCGGSLYCNGIGGTPPATLAEFTLGNEQDFYDVSLVDGYNLPISITPFKGSGKCSYAGCVSDLNTMCPVGLQVRSHDNKRVVACKSACSAFNSPKYCCTGSYGSPQACKPTVYSKIFKTACPKAYSYAYDDPTSIATCTKANYLLTFCPHRH* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03946 250 PIRSF PR5 2 250 IPR001938 -
Lapu3g03946 250 Gene3D Thaumatin 29 247 IPR037176 -
Lapu3g03946 250 ProSitePatterns Thaumatin family signature. 91 106 IPR017949 -
Lapu3g03946 250 CDD TLP-PA 30 246 - -
Lapu3g03946 250 ProSiteProfiles Thaumatin family profile. 28 249 IPR001938 -
Lapu3g03946 250 FunFam Thaumatin-like protein 1a 29 247 - -
Lapu3g03946 250 PANTHER OS03G0233200 PROTEIN 23 247 IPR001938 -
Lapu3g03946 250 PRINTS Pathogenesis-related protein signature 30 42 IPR001938 -
Lapu3g03946 250 PRINTS Pathogenesis-related protein signature 78 89 IPR001938 -
Lapu3g03946 250 PRINTS Pathogenesis-related protein signature 91 120 IPR001938 -
Lapu3g03946 250 PRINTS Pathogenesis-related protein signature 127 143 IPR001938 -
Lapu3g03946 250 PRINTS Pathogenesis-related protein signature 237 246 IPR001938 -
Lapu3g03946 250 SUPERFAMILY Osmotin, thaumatin-like protein 30 248 IPR037176 -
Lapu3g03946 250 SMART tha2 31 247 IPR001938 -
Lapu3g03946 250 Pfam Thaumatin family 35 247 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g03946 Lapu-Chr3 62927196 62928335 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g03946 10 248 Receptor kinase-like Gene Family AT5G38280 45.122 1.28e-64 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g03946 - - gmx:100784636 472.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g03946 3 62927196 62928335 Lapu3g03946 3 62927196 62928335 ECH