Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03855 ATGTATGAAGCAGGCTCAGATCCAACGAAGCCAACGGCAACCGGTTTCCCCGTGAACTACAGCACTTCAACAACCTACACCACCAACGACACTTCTTCCTACGCTCCACCGGCACCTCCTCAACCCAAACCTATCGTTGAATGGTCCACCGGCCTCTGTGATTGCCTTTCCGATGGTGGAAACTGTTGCATAACGTGGTGGTGTCCATGTATCACCTTTGGGCGGATTGCGGAAATCGTTGACAGGGGATCCTCATCATGTGGTGCTAGTGGAGCTCTATATACGCTGGTTTGTTGTGTGACATGTTGTGCTTGCGTATACTCGTGCTTCTACCGATCCAAGATGAGAAGACAGCATGGTTTAAAGGGAAATGGTTGTACAGATTGCTTGATTCATTGTTGCTGCGAGCCCTGCGCTCTCTGTCAAGAATATCGTGAGCTTGAAAACCGCGGCTTTGACATGATTATTGGGTGGCATGGAAATGTAGAGCAACGAAGTCGGGGAGTAGCCATGACTGCTGTAACAGCTCCATCAGTCGAACAGGGCATGAACCGTTGA 558 0.5 MYEAGSDPTKPTATGFPVNYSTSTTYTTNDTSSYAPPAPPQPKPIVEWSTGLCDCLSDGGNCCITWWCPCITFGRIAEIVDRGSSSCGASGALYTLVCCVTCCACVYSCFYRSKMRRQHGLKGNGCTDCLIHCCCEPCALCQEYRELENRGFDMIIGWHGNVEQRSRGVAMTAVTAPSVEQGMNR* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03855 185 PANTHER DUF614 FAMILY PROTEIN-RELATED 45 156 IPR006461 -
Lapu3g03855 185 Pfam PLAC8 family 48 146 IPR006461 -
Lapu3g03855 185 NCBIfam uncharacterized Cys-rich domain 47 149 IPR006461 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g03855 Lapu-Chr3 62142010 62143718 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g03855 - - gmx:100306298 308.531
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g03855 3 62142010 62143718 Lapu3g03855 3 62142010 62143718 ECH