Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03854 ATGACTGAGAAGGTTGCTTATGGGTCATGGTCCAGTGGTTTGTGCGACTGCTTCTCAGACTGCAGCTCTTGCTGCCTCACTCTTTGGTGTCCCTGTGTTAGCTTCGGAAGGGTAGCTGAGATTGTGGACAAAGAGTCAAATTCTTGTTGTGTGCATGGATCACTCTTCTATCTACTCGCTACTTTTACTCATGTTGGGGGCAGTATCTACGCGTGGATGTATCGTGCAAAATTAAGGGAGGTGCATAGGATTGAAGGAAACCATTGTACTGACTGTTTGGTGAGTTGTTGTTGCCTCCATTTATCCATTTGCCAGGAGTATCGTGAGCTCAAAGCCCGCGGATTTGACATGTCTGCTGGTTGGGAAGGGAACGTGGAAATGAATACACGTGGCGTGACTTCAGCACCTGCAGTGGAAGGTGGCATGAACCGTTGA 435 0.4828 MTEKVAYGSWSSGLCDCFSDCSSCCLTLWCPCVSFGRVAEIVDKESNSCCVHGSLFYLLATFTHVGGSIYAWMYRAKLREVHRIEGNHCTDCLVSCCCLHLSICQEYRELKARGFDMSAGWEGNVEMNTRGVTSAPAVEGGMNR* 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03854 144 NCBIfam uncharacterized Cys-rich domain 9 111 IPR006461 -
Lapu3g03854 144 PANTHER DUF614 FAMILY PROTEIN-RELATED 6 119 IPR006461 -
Lapu3g03854 144 Pfam PLAC8 family 10 109 IPR006461 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g03854 Lapu-Chr3 62137877 62138643 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g03854 - - ccaj:109809364 200.675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g03854 3 62137877 62138643 Lapu3g03854 3 62137877 62138643 ECH