Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03845 ATGGCCGCCAAACGGTTTTTCGATGATTCTGATCAAGATACCAACAAGACTGGTGATAAACGGATGAGGCCCACAACAAGACCTTCTTTCGCTTCGGTGATAGGAGAAGTCGTCATGGTAAAAAACTTGCAGAACCTTTTCTCCGGCTTGGAACCCTTGCTTAGAAGAGTGGTGAACGAAGAGGTGGAGCGAGCGATGAGGCATTGTGTTCCACGTTCAATAACCAGGTCCCCTTCGTTGAGGATCAAAGCATTGGAGCAACCAACAAACTATGAACTCAAGTTCGACAAGAAGCTATTGCCCACTATATTCACAGGAAGCAGAATATTAGACGCAGATGGGAACCCCATCCTTGTTGTTCTTGTTGATAAAAGCGGTGGCCAAATGGTTCGCACGAGTCTCCCCCACCCCATCAAGCTAGAAATCGTGGTTCTTGATGGAGATTTTCCTCCTAATAATGATAACAACGAGTCATGGACGAGTGAGGAATTCAACAGCCGCATAGTGAAGGAGAGAACAGGAAAGAGGCCGTTGCTCACAGGAGAATTGAATCTGACCATGAGGGATGGGATTGCACCAATTGAAGACATTGAATTCACTGATAATTCCAGTTGGATAAGAAGCAGGAAGTTCAGAGTTGCTGTTAGAGTTGCTCCTGGGAGTGATCAAACTGTTAGAATTCGTGAAGGCATGACAGAACCATTTGTTGTTAAGGATCATCGTGGTGAATTGTACAAGAAACATCATCCACCTATGCTCCACGACGAAGTGTGGCGCCTAGAGAAGATTGGCAAAGACGGAGCTTTCCACAAAAAAATGGCCAACCAGGGAATAAACAGTGTGCAAGACTTTCTCAAGTTATCTGTTGTTGATGCCCAGAGACTCAGAAAGATTTTGGGCGTTGGGATGTCAGAGAAAATGTGGGATGCTACAATCAAGCATGCAAAGACTTGTGATAAGGGCAACAAATACTATGTCTATCGTGGGCCTACTTTTACCGTCTTTCTCAATTCTATATGCCAATTGGTTAGAGCTGATATTAATGGTCAAAGTTTTCCTGGAAGAGAGCTAAGCAACATGACAAGGAGCTATATGGAAAGATTAGTGAGAGAAGCATATGCGAGATGGAATGAGTTGGAGGAAATCGATGGGGCTTTGTTAACCCAAGGTGAAACCATGGAGCAATTTCCAAACAATCTTCAAGCATCAGTTATATCATATGATCAGAACGAGTACTTTGGCGACAAATCTGCAGAAGGTGGGAACTATGTACCAACCGATAATGCACAAATTGGGTGCAGCAGCGGGTGGGGTGTGAATGCAACATTTGGCACAACATCATTTGTGAATGCCATACCTTACAGCCTCTCAGATTCACAATCGGACGGTGACATAACGACCTCAGTTGATGGTGCCAATGGGTGGAACTAG 1431 0.4458 MAAKRFFDDSDQDTNKTGDKRMRPTTRPSFASVIGEVVMVKNLQNLFSGLEPLLRRVVNEEVERAMRHCVPRSITRSPSLRIKALEQPTNYELKFDKKLLPTIFTGSRILDADGNPILVVLVDKSGGQMVRTSLPHPIKLEIVVLDGDFPPNNDNNESWTSEEFNSRIVKERTGKRPLLTGELNLTMRDGIAPIEDIEFTDNSSWIRSRKFRVAVRVAPGSDQTVRIREGMTEPFVVKDHRGELYKKHHPPMLHDEVWRLEKIGKDGAFHKKMANQGINSVQDFLKLSVVDAQRLRKILGVGMSEKMWDATIKHAKTCDKGNKYYVYRGPTFTVFLNSICQLVRADINGQSFPGRELSNMTRSYMERLVREAYARWNELEEIDGALLTQGETMEQFPNNLQASVISYDQNEYFGDKSAEGGNYVPTDNAQIGCSSGWGVNATFGTTSFVNAIPYSLSDSQSDGDITTSVDGANGWN* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03845 476 MobiDBLite consensus disorder prediction 1 26 - -
Lapu3g03845 476 MobiDBLite consensus disorder prediction 1 23 - -
Lapu3g03845 476 Pfam Calmodulin binding protein-like N-terminal domain 91 240 IPR046831 -
Lapu3g03845 476 PANTHER OS02G0177800 PROTEIN 1 417 IPR012416 GO:0005516
Lapu3g03845 476 Pfam Calmodulin binding protein central domain 252 318 IPR046830 -
Lapu3g03845 476 Pfam Calmodulin binding protein C-terminal domain 323 382 IPR046829 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g03845 Lapu-Chr3 62028851 62032552 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g03845 3 387 Calmodulin-binding Proteins AT5G57580 48.462 9.44e-117 355
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g03845 - - gmx:100802257 782.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g03845 3 62028851 62032552 Lapu4g00204 4 2026710 2030907 PCT