Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03824 ATGAACATTTGTGGTTGTTGGGTATCGTCAATGAAATTCCCCTTTCACGGTTGGCGCTTCTCAACTCCCTTTTTCTCTCTTTCTTCTTCCTCTCGCAATCGCATTATGACCATTCCAAATTGTTCTTCCAATTCTTCTGCTTCCGTGTCAACGGTTTCCAAAGAGAAGAAGAAGGAAAATTTACCTTGGTTGATTGTTGGCCTCGGCAATCCAGGCAAAAAGTACGTCGCCACTCGCCACAATGTGGGCTTTGAGATGATTGATGCCATAGCTGAAGCTGAAGGGATATCTATGAACACTGTTTCCTTCAAAGCGTTATTTGGAAAAGGTTTAATAGGTGATGTACCAGTCATACTTGCAAAACCACAGACTTTTATGAATTCAAGCGGTGAATCTGTTGGGGCCATAGTTTCATATTACAAGATTCCACTGAAGCAAGTACTTGTGATTTTTGATGACTTGGATTTACCTTTTGCTAAATTACGGCTTCTACCAAAGGGTGGACATGGAGGTCACAATGGAATGAAGAGTGTTATTAATCACTTCAAAGGGAATACTGGTTTTCCTCGTTTAAGAATTGGCATTGGACGACCTCCCGGTAAAATGGATCCTGTTGCATTTGTTCTTCGCACGTTCACTAAACAGGAAAGGGAAGAGTTGAATTTTACATTACAAGATGGAATAGAAGCTCTGCGGATTCTTTTGCTTGAGGGATTTGATAAAAGTGCAACATTTGTTAATAGTGCCAAAAAGATAGAGCAAACAGGTTGA 771 0.406 MNICGCWVSSMKFPFHGWRFSTPFFSLSSSSRNRIMTIPNCSSNSSASVSTVSKEKKKENLPWLIVGLGNPGKKYVATRHNVGFEMIDAIAEAEGISMNTVSFKALFGKGLIGDVPVILAKPQTFMNSSGESVGAIVSYYKIPLKQVLVIFDDLDLPFAKLRLLPKGGHGGHNGMKSVINHFKGNTGFPRLRIGIGRPPGKMDPVAFVLRTFTKQEREELNFTLQDGIEALRILLLEGFDKSATFVNSAKKIEQTG* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03824 256 ProSitePatterns Peptidyl-tRNA hydrolase signature 1. 75 88 IPR018171 GO:0004045
Lapu3g03824 256 PANTHER PEPTIDYL-TRNA HYDROLASE 53 247 IPR001328 GO:0004045
Lapu3g03824 256 Hamap Peptidyl-tRNA hydrolase [pth]. 62 240 IPR001328 GO:0004045
Lapu3g03824 256 FunFam Peptidyl-tRNA hydrolase 60 250 - -
Lapu3g03824 256 ProSitePatterns Peptidyl-tRNA hydrolase signature 2. 168 178 IPR018171 GO:0004045
Lapu3g03824 256 Gene3D - 47 250 IPR036416 GO:0004045
Lapu3g03824 256 SUPERFAMILY Peptidyl-tRNA hydrolase-like 62 247 IPR036416 GO:0004045
Lapu3g03824 256 Pfam Peptidyl-tRNA hydrolase 64 242 IPR001328 GO:0004045
Lapu3g03824 256 NCBIfam aminoacyl-tRNA hydrolase 63 232 IPR001328 GO:0004045
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g03824 Lapu-Chr3 61728919 61731510 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g03824 K01056 - gmx:100526866 430.254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g03824 3 61728919 61731510 Lapu3g03824 3 61728919 61731510 ECH