Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03691 ATGGCTGGCTCGTTGGCAAGCCGTTCTCTGATTGTTCTTGCCATCATATCCTTCGGATGTCTATTTGCAATTTCCATTGCAAAGGAGGAAGCTACCAAGTTGGGGACTGTCATTGGGATTGATCTTGGAACGACCTATTCTTGTGTCGGTGTTTATAAGAATGGCCATGTTGAAATCATAGCCAATGACCAAGGTAACCGTATCACTCCATCGTGGGTTGCCTTCACCGACAGTGAGAGACTCATCGGGGAGGCTGCCAAGAATCAGGCAGCTGTCAACCCCGAAAGGACCATCTTCGATGTTAAGAGACTCATCGGAAGAAAGTTTCAAGATAAGGAAGTTCAAAGAGACATGAAGCTCGTTCCTTACAAAATTGTCAATAAGGATGGAAAACCTTACATAGAGGTGAAAATTAAGGATGGTGAGAACAAGGTTTTCAGCCCTGAGGAAATCAGTGCCATGGTTTTGACTAAGATGAAGGAAACCGCGGAAGCATTCCTTGGGAAGACAATTAAGGATGCTGTGGTCACTGTCCCAGCTTACTTCAACGATGCTCAGAGGCAGGCCACCAAGGACGCTGGTGTCATTGCTGGTCTTAATGTTGCTAGAATTATTAATGAACCCACTGCTGCCGCCATTGCGTATGGATTGGACAAGAAAGGTGGCGAGAAGAACATTCTAGTCTTTGATCTTGGGGGTGGGACATTTGATGTCAGTATCTTGACAATTGATAATGGTGTTTTTGAGGTTCTTGCGACAAACGGAGATACTCATCTTGGAGGTGAGGACTTTGATCAGAGAATAATGGAGTACTTCATTAAATTGATCAAGAAGAAGCACGGAAAGGATATTAGCAAGGACAACAGAGCACTTGGGAAGCTGAGAAGAGAGGCCGAGCGTGCGAAGAGAGCTCTCAGTAGCCAGCACCAGGTCCGCGTGGAAATTGAATCACTTTTTGATGGTGTTGATTTCTCTGAGCCACTCACCCGAGCTCGGTTTGAGGAGTTGAACAATGACTTGTTCCGGAAGACAATGGGACCAGTGAAGAAGGCTATGGAAGATGCTGGATTACAGAAGAGTCAGATTGACGAGATTGTTCTTGTTGGTGGAAGCACAAGGATTCCAAAGGTTCAACAGCTTTTGAAGGACTACTTTGACGGAAAGGAGCCAAACAAGGGTGTCAACCCTGATGAAGCAGTTGCCTATGGTGCTGCAGTGCAAGGAAGCATTTTGAGCGGAGAGGGTGGTGAAGAAACCAAAGATATCCTTCTCCTGGATGTGGCTCCCCTCACCCTTGGAATTGAAACTGTTGGTGGAGTGATGACAAAGTTGATTCCGAGAAACACTGTTATCCCTACCAAGAAATCTCAGGTGTTTACAACCTACCAGGACCAGCAGACTACTGTCTCCATTCAGGTATTCGAAGGTGAGAGGAGTCTCACAAAGGACTGCCGTCTGCTTGGGAAATTTGATCTGTCAGGAATTCCTCCAGCTCCAAGGTTAGTTTCATGCTTTCGCGATGACAGTGCGCTCTTGAAATATTGCTTGAGTTGGTGTTTGTAA 1563 0.46 MAGSLASRSLIVLAIISFGCLFAISIAKEEATKLGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPERTIFDVKRLIGRKFQDKEVQRDMKLVPYKIVNKDGKPYIEVKIKDGENKVFSPEEISAMVLTKMKETAEAFLGKTIKDAVVTVPAYFNDAQRQATKDAGVIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLATNGDTHLGGEDFDQRIMEYFIKLIKKKHGKDISKDNRALGKLRREAERAKRALSSQHQVRVEIESLFDGVDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLQKSQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGSILSGEGGEETKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRLVSCFRDDSALLKYCLSWCL* 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03691 520 ProSitePatterns Heat shock hsp70 proteins family signature 3. 365 379 IPR018181 -
Lapu3g03691 520 CDD HSPA5-like_NBD 35 409 IPR042050 -
Lapu3g03691 520 FunFam Heat shock protein 70 38 225 - -
Lapu3g03691 520 FunFam Heat shock 70 kDa protein 336 391 - -
Lapu3g03691 520 Gene3D - 38 409 - -
Lapu3g03691 520 PRINTS 70kDa heat shock protein signature 64 76 - -
Lapu3g03691 520 PRINTS 70kDa heat shock protein signature 394 414 - -
Lapu3g03691 520 PRINTS 70kDa heat shock protein signature 86 94 - -
Lapu3g03691 520 PRINTS 70kDa heat shock protein signature 362 378 - -
Lapu3g03691 520 PRINTS 70kDa heat shock protein signature 421 440 - -
Lapu3g03691 520 PRINTS 70kDa heat shock protein signature 174 194 - -
Lapu3g03691 520 PRINTS 70kDa heat shock protein signature 36 49 - -
Lapu3g03691 520 PRINTS 70kDa heat shock protein signature 234 244 - -
Lapu3g03691 520 Pfam Hsp70 protein 37 500 IPR013126 GO:0005524|GO:0140662
Lapu3g03691 520 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 410 506 IPR029047 -
Lapu3g03691 520 SUPERFAMILY Actin-like ATPase domain 35 219 IPR043129 -
Lapu3g03691 520 FunFam Chaperone protein HscA homolog 226 274 - -
Lapu3g03691 520 Coils Coil 284 304 - -
Lapu3g03691 520 FunFam Endoplasmic reticulum chaperone BiP 260 343 - -
Lapu3g03691 520 ProSitePatterns Heat shock hsp70 proteins family signature 2. 228 241 IPR018181 -
Lapu3g03691 520 ProSitePatterns Heat shock hsp70 proteins family signature 1. 40 47 IPR018181 -
Lapu3g03691 520 Gene3D Actin; Chain A, domain 4 260 343 - -
Lapu3g03691 520 PANTHER HEAT SHOCK PROTEIN 70KDA 37 503 IPR013126 GO:0005524|GO:0140662
Lapu3g03691 520 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 417 500 IPR029047 -
Lapu3g03691 520 FunFam Heat shock protein ssb1 99 154 - -
Lapu3g03691 520 SUPERFAMILY Actin-like ATPase domain 222 413 IPR043129 -
Lapu3g03691 520 Gene3D - 220 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g03691 Lapu-Chr3 60338005 60342117 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g03691 1 500 Miscellaneous Gene Families AT5G28540 92.800 0.0 956
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g03691 K09490 - gmx:547839 954.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g03691 3 60338005 60342117 Lapu3g03691 3 60338005 60342117 ECH