Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03686 ATGACTGCAGCAGATATTGCTAGAACAGTGGTTGGCATCATGGGAAACATCATCTCTGGTGCCTTGTTTCTCTCCCCAGTGCCAACTTTTATAGAAATATGGAAGAAGGGATCAGTGGAACAGTTCTCACCAATCCCATACCTAGCGACGCTGGTGAACTGCATGGTGTGGACCCTCTACGGTCTACCCATGGTGAACCCACACAGCATTTTGGTGGTAACCATCAATGGCTCTGGTTCTGTTATTGAACTCATATTTGTCACACTCTTTTTGATCTACTCCGATGGAAAAAAGAGGCTCAAGGTTATCCTCTGGCTCTCGTTGGAACTCGCTTTCATTGCTGCTCTCACCTTTGTCACATTAACCCAAGTCCACACCCTCAAGAAACGTGCTGAAGTTGTGGGAACCGTTTGCATTCTCTTCAACATCATGATGTATGCTTCACCCTTATCTATCATGAAACTGGTGATCAAGACAAAGAGTGTGGAATACATGCCCTTTTATATCTCTCTCGCCTCTTTAGGGAACGGTGTGGCTTGGACCACTTATGCTCTCATCCGTTTCGACCCATTCATCACTATACCAAATGGGCTTGGGACATTGTTTTCAGTGGCTCAACTGATTCTGTATGCCACCTATTACAAGTCAACTCAGAGGCAGATAGAAGCAAGAAATGCCAACAAAGAGGTGAATTTGTCACGAGTTGTGGTGGCTAATGGTGGCCAACAATCCAAGGCAAATCACTGA 747 0.4538 MTAADIARTVVGIMGNIISGALFLSPVPTFIEIWKKGSVEQFSPIPYLATLVNCMVWTLYGLPMVNPHSILVVTINGSGSVIELIFVTLFLIYSDGKKRLKVILWLSLELAFIAALTFVTLTQVHTLKKRAEVVGTVCILFNIMMYASPLSIMKLVIKTKSVEYMPFYISLASLGNGVAWTTYALIRFDPFITIPNGLGTLFSVAQLILYATYYKSTQRQIEARNANKEVNLSRVVVANGGQQSKANH* 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03686 248 PANTHER RAG1-ACTIVATING PROTEIN 1 13 224 IPR047664 -
Lapu3g03686 248 FunFam Bidirectional sugar transporter SWEET 9 99 - -
Lapu3g03686 248 Gene3D - 6 99 - -
Lapu3g03686 248 Gene3D - 126 219 - -
Lapu3g03686 248 FunFam Bidirectional sugar transporter SWEET 130 223 - -
Lapu3g03686 248 Pfam Sugar efflux transporter for intercellular exchange 133 217 IPR004316 GO:0016020
Lapu3g03686 248 Pfam Sugar efflux transporter for intercellular exchange 10 97 IPR004316 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g03686 Lapu-Chr3 60285448 60289262 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g03686 5 244 Miscellaneous Gene Families AT4G10850 55.372 2.48e-93 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g03686 K15382 - gmx:100802303 402.134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g03686 3 60285448 60289262 Lapu3g03686 3 60285448 60289262 ECH