Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03682 ATGGCTTCGTCTTCACTCACTTTGGTTCCTCTCTCCTCTTCTTCTCTCAACGTTCCTCATTCTTCTTCCAAAATCCCTTCCAATTTTATAGCTTCTCCTGTTGGCGCATTCTCTCGTGGTCCCAAATTTCTCTTTGCGGAATCAAGACCCCATTTTCACCCAAAGAGAAACGGTTCTAAGTTTTCCATCAAAGCCCAAACCCTAGACTTCTCCGATTCCTTCTTCGAAGGGGGTTTCGGCTCCGAAGACGACCCCAATTCTCCCGGCGGAACCGGGTTCACGGCCGTCGAGGAAAAGGAGGATCCTCCCTGCCCACCCGGTCTCCGACAGTACGAGACAATGATGGTTTTGAGGCCCGATATGACCGAGGATGAGCGGCTTGCACTCACCCAGAAGTACGAGGAGATTCTTGTTGCTGGAGGTGGCATGTATGTAGAGGTTTTTAACAGAGGAGTTATTCCCCTAGCATATGGCATCAAGAAGAAAAACAAAGCTGGGGAGACCAACACTTATTTGGATGGCATCTACCTGCTGTTCACCTACTTCACCAAGCCTGAATCCATAAGCCCTCTCGAGGAGACAGTGTTAGCGGATGATAATGTTATCCGATCAATGAGTTTTAAAGTTAGGAAGAGGAAATATTAG 645 0.4806 MASSSLTLVPLSSSSLNVPHSSSKIPSNFIASPVGAFSRGPKFLFAESRPHFHPKRNGSKFSIKAQTLDFSDSFFEGGFGSEDDPNSPGGTGFTAVEEKEDPPCPPGLRQYETMMVLRPDMTEDERLALTQKYEEILVAGGGMYVEVFNRGVIPLAYGIKKKNKAGETNTYLDGIYLLFTYFTKPESISPLEETVLADDNVIRSMSFKVRKRKY* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03682 214 Gene3D - 107 214 IPR014717 -
Lapu3g03682 214 PANTHER MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S6 99 214 IPR000529 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Lapu3g03682 214 SUPERFAMILY Ribosomal protein S6 108 212 IPR035980 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Lapu3g03682 214 Pfam Ribosomal protein S6 110 208 IPR000529 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Lapu3g03682 214 MobiDBLite consensus disorder prediction 1 20 - -
Lapu3g03682 214 FunFam 30S ribosomal protein S6 alpha, chloroplastic 107 214 - -
Lapu3g03682 214 Hamap 30S ribosomal protein S6 [rpsF]. 108 211 IPR020814 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Lapu3g03682 214 CDD bS6_chloro_cyano 108 209 - -
Lapu3g03682 214 MobiDBLite consensus disorder prediction 79 106 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g03682 K02990 - gmx:100500072 344.354
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g03682 3 60265039 60267233 Lapu3g03682 3 60265039 60267233 ECH