Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03678 ATGGGGTGTGCTTCCTCCAAGGGTGTGGATGTTGCGGCGGTACCTTACCGTCCGGCACCAACCAGCTTCGCGGTGTTCGACATAAACGCCATCGAGGAGCCATGGCTGAAGCACCTCAACGACACCACCACCCAACTCCACCAAGACAAAACCCCTCTCCCCGCCCCTATCCTCCACAAACTCAACATGCTCGACGCCACCGACGCCCCTCAATCCTGGGACGAGGTCAGCAAAACACTCCAAGACCTCAAACCCGTCATCACCAAACCACCTTCCACGTCACCACCCAAACCACCCCAGCAACCTCAACCTCCACAGAAAACCAACTCCTTCCACACACTGGAAGAGTTAGACGCCAAGACAAACCCCAAGCCCGGAGCAGTAAAGCCCGAAGCAGCACAACCCGAAGCAGTAAAGCCCGGTGAGGCTAACGTGAAGGTAAACGTGGCACGAGGGAGCAAGTTGAAGGAAAACTTGTTCATAGTGCGGGACAGGATGGAGAGAGAGAAGGAGGAGAAGGAGTCGGCGTTCGAGCGGCTTCGAAGGGACCCACTAAGCGCGTTTCCGGAGAAGTGTCCGCCGGGGGGGAGCGAGACGGTGGTGGTGTACACGACGTCGTTGCGGGGCGTGAGGAAGACGTTCGAGGACTGCAACAGGGCGCGCGACGTGCTGGAGACGCACCGCGTGGTGTTCGACGAGCGCGACGTGTCGCTGCACGGGGAGTTTCTCCGCGAGGTGAAGGAGCTGGTGGGCGAAACGGTGGCGCTGCCGCGGGTGTTCGTGAAGGGGAGGTACGTGGGGGGGTTGGAGGAGTTGAATGAGCTGAACGAGACGGGTCGACTGGGGAGGATACTGAGGGCCACACGTGTGGAGAGGGGGATTGGGAGGCAAACGTGTGGAGGGTGTGGTGGGGCCCGGTTTGTGCCTTGTTTGGAATGTGGTGGTAGCTGCAAGCTTGTGGTGAATGGAGTGGAGAAAGAGAGGTGTCCCAAGTGTAATGAGAATGGCTTAGTTCATTGCCCTTCTTGTATTTGA 1035 0.5874 MGCASSKGVDVAAVPYRPAPTSFAVFDINAIEEPWLKHLNDTTTQLHQDKTPLPAPILHKLNMLDATDAPQSWDEVSKTLQDLKPVITKPPSTSPPKPPQQPQPPQKTNSFHTLEELDAKTNPKPGAVKPEAAQPEAVKPGEANVKVNVARGSKLKENLFIVRDRMEREKEEKESAFERLRRDPLSAFPEKCPPGGSETVVVYTTSLRGVRKTFEDCNRARDVLETHRVVFDERDVSLHGEFLREVKELVGETVALPRVFVKGRYVGGLEELNELNETGRLGRILRATRVERGIGRQTCGGCGGARFVPCLECGGSCKLVVNGVEKERCPKCNENGLVHCPSCI* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03678 344 Gene3D Glutaredoxin 198 292 - -
Lapu3g03678 344 MobiDBLite consensus disorder prediction 89 105 - -
Lapu3g03678 344 SUPERFAMILY Thioredoxin-like 193 285 IPR036249 -
Lapu3g03678 344 Coils Coil 156 183 - -
Lapu3g03678 344 FunFam Glutaredoxin family protein 197 293 - -
Lapu3g03678 344 Pfam Glutaredoxin 200 266 IPR002109 -
Lapu3g03678 344 ProSiteProfiles Glutaredoxin domain profile. 188 292 - -
Lapu3g03678 344 MobiDBLite consensus disorder prediction 85 140 - -
Lapu3g03678 344 CDD GRX_GRX_like 200 340 - -
Lapu3g03678 344 PANTHER GLUTAREDOXIN DOMAIN-CONTAINING CYSTEINE-RICH PROTEIN CG12206-RELATED 119 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g03678 Lapu-Chr3 60238996 60240160 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g03678 K17479 - gmx:100809536 489.189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g03678 3 60238996 60240160 Lapu3g03678 3 60238996 60240160 ECH