Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03672 ATGTCCATGTCTATGAGCTGCTTTTGCTTGAAGAAAGCTAGACCACAGACTAAGCCAGAACTATCCACCATTCTTGCTTCGGAAACATCCTATGTCCTTTACCCTTTGACAGTTACTGTGAATGAAATTGAGGCTTTGCTTTGCACGTTTAAGAAACTATGTAGTGCAATTGTTGATGATGACTTCCTTCACAAGGAGGAGTTCCATCTTGCACTTTTTAATAATGGTAGCAAGCAGAATCTATTTGCAGATAGGTTGCATTTAGATTGTTTGACCTTACACAGAGTGGATATATTGAGCATCACGAGTTTATGGTTCGTTCTTATTATTTATGCATTCCCTTTTGTGCTTAATGGTACACTCAAGTTGAAGGAAATGGTGTTGGCTACTCTCACTGAATCAGATGTTACAGTTCCCGATGATGTTCTTGAAGCAATTGTGGACAAGACAATGAAGGAGGTTGATTCAAAAGGAGATGGAAAGATAGATAGTGAAGAGTGGAGAGATTATGTGACAAAAAATCCTTCTCTTCTGAAGATCATGACTCTACCCCATCTGAAGGATATAACTCTGGCATTTCCCAGCTTTATTTTGCACTCTGAGGTGGAAGACTAG 615 0.3935 MSMSMSCFCLKKARPQTKPELSTILASETSYVLYPLTVTVNEIEALLCTFKKLCSAIVDDDFLHKEEFHLALFNNGSKQNLFADRLHLDCLTLHRVDILSITSLWFVLIIYAFPFVLNGTLKLKEMVLATLTESDVTVPDDVLEAIVDKTMKEVDSKGDGKIDSEEWRDYVTKNPSLLKIMTLPHLKDITLAFPSFILHSEVED* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03672 204 Gene3D - 36 97 - -
Lapu3g03672 204 Gene3D - 118 204 - -
Lapu3g03672 204 SUPERFAMILY EF-hand 34 196 IPR011992 -
Lapu3g03672 204 PANTHER CALCINEURIN B 6 86 IPR045198 GO:0005509|GO:0019722|GO:0019900
Lapu3g03672 204 ProSiteProfiles EF-hand calcium-binding domain profile. 142 177 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g03672 Lapu-Chr3 60184391 60186597 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g03672 5 204 EF-hand Containing Proteins AT4G17615 39.908 6.64e-46 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g03672 K06268 - vra:106766823 239.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g03672 3 60184391 60186597 Lapu3g03672 3 60184391 60186597 ECH