Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03648 ATGGTGAAACATCGCCTTAGAGAGTCTATCAAATCTTTATTTGGAAGTCATATTGACTCTAATAAAGAAGAGCAGCTTCAGGTAGCTAAAGCAGACATCGAAGACAAAGTGAAAGAAATATTGAAACTTATTAAAAATGATAACCTTGAAGAGGACGGTACCCCAGTACAACTTTCTAAGAGGGAACCACTTATTGAACTGATTGAAGATTTCCACAATCAATACCAATCACTGTACGCACAATATGATCATCTAACAGGAGATTTAAGGAAAAGGATTAACGGCAAGCGAGAAAATGGGAGTTCTTCATCCAGCTCAGACTCAGATTCAGATTCAGATTATTCTTCAAAGGACAAAGGCAACAAAAACGGACAACTGGAAAATGAATTTCAAAAGACGATCGATGGCTTAAAGCAAGAGCTTGAAGTGGTGCATGTAGAAGTGGATGAATTAAATCGGAAGTTGACAATTTCACACGAAGAGAAGGAGGATCTTAATTCCAAATATCTTGCAGCACTGAGCAAGATACAAGAAGCAGATACAGTTAACATGGATTTGAAAAGTGATGCTGAAGCATTAGACGCTCAAAGATCTAAACTTTTTGTTGAGAATGCTGAACTAAATAAACAAGTGGATAAAATAGAAGCTGAACTGGGTCAAAGATTGGAAGAGTTAAATATAGAAAAAAATAGTTTGACCATGGAGAAGGAGACAGCTCTCCAGCAGATTGAGGAGGAAAAGAAGATTACTAATGGCCTGAGAACCCTTATTGATCAACTGAAAGAGGAGAAATTAACTCTTGGCAAAGAGTTAGAGGCAGTTACAGGTGAACTTTCCAATGTAAAACAGCAGTTGGAACACGCAGAACAGAAAATGACAGATACAAGCCACAATCTGAAAGTTGCTGAGGAAGAAAACGAAACTTTAAAAGCACAACTTTCACAGGCTTCAAATGAGGTTCAGCTGGGTCAGAGTAGAATACAAGAATTTGTAGCTGAATCAAGTCAGTTAAAGGAGAAACTTGATGAGAGTGGAAGGGGAATTTCTGCCTTCACTCAGATGCATGAAGGGTTTCAGAAAGAATCCTCAAATCGTATCAGGGAACTTGAGGCACAGATCACCAAGTTGGAGTCGGAGTTAGAATCACTGCAAAACCAGAAACGAGATACAGAAGAGCAAATGAAGAGCAGCACCACTGAAGCAAGGGAACTAGGAGAGCACAATTCAGTCCTACAAAACCAAATATCACAACTTGACTTGAAGTCCAGAGAAAGAGAAGAGGAGCTATCTGCTATGGTGAAGAAACTTGAAGATAATGAGAATGAGTCATCTTCGAAAATGTCAGATTTAACCTCTCAGATAAACAAGCTGCCGGTTGATATCGGGACACTACATACTCAGAAAAATGAACTGGAAGAGCAGATAATTTTTAAAAGTAACGAAGCTTCGACTCAAGTCGAAAGCATTACAAATGAGGTGAATGCATTGCAGCAAGAAGTAACGTCCCTCCAACAACAGAAATCTGACTTGGAAGCTCAGTTAGTAGAAAAAGTCCACGAAAATTCCAAGAATGTGATTGAAATGCAAACTCTGAAAGAGGAAATTGACAGAAAAATCCTGGAACAAGAGAAACTTCTGGAAGACAGAGAAAATTTAGCCATGCAGCTAAGGACATTGGAATCAGAGATAAACACCATTCAGAACAAAAACAGTGAAGCTGAAGAGCAAATAAGGGCTAAAAGCCATGAGATCAGTCACATGAAACAGGGAATGTTGGAGCTACATGACAAAATAGCAGAAATAGAGAAGATCTCAACAGATAGGGAATCAAATCTGTTGATTCTCCAGGATAAGTTTATTAGCACAGAGCAAGCAGTTTCAGCTCAAATAATGGCCTCCAGTGAACAAATTAAGAATCTTGAACATGATTTGGAATCACTGCAGAAAGAGAAACACGAATTTGAACAGCAGTGTGAAAATCTGAGGTCGGAGGTGGATTCTATACAGAACCAGAAGAGTGAAGTTGAAGAAAAAATGAGAACTAAAGACCATCAGAACTCTGGACTAAGGGAGGAAATTTTGGGATTGCAGGGAACAATTGCTGTGCTGGAGAAGACATTAGCCGAGAAAGAGGCAGAGCTATCAAGTTTACAGGAAAAGCTTCATGAAAAAGAGAGCGAGGCTTCAGGTCAAATAACTCACTTCACAGTCCAGATTGACAATCTAAAACATGATTTGGTGTCCCTGCAGAGTGAGAAACAGGAAGCAGAACAGCAGTGTATGAAGCTGAAGATGGAGCTGGATTCCACACAAAACCAGAAAGTTGAAGTTGAAGAGCAGATGAGAGCTAAAGACCAAGAGAACACGGAACTGAGAGAGGAAAACTTTGGATTGCAGGGAACAATTACTGCACTACAGAAAACATTAGCCGAGAAAGAGGCAGAGCTATCCACTTCACAGGAAAAACTTCATGAAAAAGAGAGCGAGGCTTCAGGCCAAATAACTTCCTTCACACTCCAGACTGAAAATCTGAAACATGATTTGGTGTCCTTGCAGAATGAGAAACAGGAAATAGAACAGCGGTGTGAAAAGCTGAAGATGGAGCTGGATTCCTCTCAAAACCAGAAGGGTGAAGTTGAAGAGCAAATCAGAGCTAAAGACCACGAGAACTATGAACTGAGAGAGGAAATTTTGGGATTGGAGGGAAAGATTACTTCACTGGAGAAAACATTAGATGAGAAAGAGTCAACGTTGTCCACTTTACAGGAAAATCTTCAGCAAAAAGATAGTGAGGCTTCTGGCCAAATAACTGCTTTCACAGGCCAAATTGATAATCTGAAACATGATTTGGTGTCCCTACAGAATGAGAAACAAGAATTAGAACAGCAGTGTGAAAAGCTGAAGATGGAGGTGTATTCCACACAAAACCAGAAGGGTGAAGTTGAAGAGCAAATCAGAGCTAAAGACCACGAGAACTATGAACTGAGAGAGGAAATTTTGGGATTGGAGGGAAAGATTACTGCACTGGAGAAAACATTAGATGAGAAAGAGTCAGAATTATCCACTTTACAGGAAAAGCTTGACGAAAAAGAGAGTGAGGCTTCCGGGCAAGTAATAGCCTTCACGGCCCAAATTGATAATCTGAAACATGATTTGGTGTCCCTACGGAATGAGAAACAAGAATTAGAACAGCAGTGTGAAAAGCTGAAGATGGAGGTGGATTCCACACAAAACCAGAAGGGTGAAGTTGAAGAGCAAACCAGAGCCAAAGACCATGAGAACTCTAAACTGCGAGAGGAAATTTTGCGATTGGAGGGGACGATTACTGCACTGGAGAAAACATTAGCTGAGAAAGAGTCAGAATTATCCACTTTACAGGAAAAGCTTGACGAAAAAGAGAGTGCGGCTTCCGGGCAAGTAATTGCCTTCACGGCCCAAATTGATAATCTGAAACATGATTTGGTGTCCCTACGGAATGAGAAACAAGAATTAGAACAGCAGTGTGAAAAGCTGAAGATGGAGGTGGATTCCACACAAAACCAGAAGGGTGAAGTTGAAGAGCAAACCAGAGCCAAAGACCATGAGAACTCTAAACTGAGAGAGGAAATTTTGCGATTGGAGGGAACGATTACTGAACAGGAGAAAACATTAGCTGAGAAAGAGTCAGAATTATCCACTTTACAGGAAAAGCTTGACGAAAAAGAGAGTGAGGCTTCCGGGCAAGTAATTGCCTTCACGGCCCAAATTGATAATCTGCAAAAAGACTTACTTTCCTTACAGAAAACAAAAGAAGAGTTGGAGCTCCACTATGAAAAAATTAGTGAAGAACATGCAGAAAGCCTTGTAATGGTAGAGAATGAAAAGAATGACATATCAAGCAGGACAATAGATCTTAAGAGAACGCTAGAAGAGCGAGAAGGTTCATATCAGAGGTTAAATGAAGAATATAAACAAATTGATGGTTTGGTTCAGGAATACATGGTCAAGCTTGAAGCTGCAGAGAAGAAGATTGAAGAAATGGCAGGAGAGTTTCATGAAGGAATTGAGTTGAAAGATCAGAAGGTAGCTGATTTGGAACATACAGTAGGAGACCTGAAAAGAGACCTAGAAGAGAAAGGAGATGAAATCAGTACTTTGCTTGATGATGTTCGGATGCTTGAGGTTAAGCTTCGTCTATCAAACCAGAAGCTCCGGGTCACAGAGCAATTGCTGAGTGAGAAAGAAGAAAGCTTCAGGAAAACAGAGGAAAAGTTTCAGCAAGATCAGAGAGCACTTGAAGACAAAACTGCTAGTTTATCAGCAATAATAACTGCCAACAGTGAAGCTCTGGATGAAATTGTGTCTAATGTCAGAGAATGTGTGAACAGTGTCATGACTGCCATAGAAATTGTAAGCTGTCGAGTTTCTGACGACTGCAAAAATTACGAGGAGTGCGTCTCTAACATCTCACGCGAGCTTGAGGTCGCAAAGGGGCAAGTGAGGGAGATGAATATGGAAAAAGAGCAACTAAAGAGAGACAAAAGGAAGTTGTTGGAGCAACTGCAAGTTAAAAATGAAGAGGAGGTGGCTTTGAGGAAGAAAGTTGAGAAGCTAGAGGCAAAGACAAACAGGGAGGAATCAGAGAAGATGAATCTGACAACAACTGTAGTTCAACTAAAGAAGACAGTTAGAGAGCTGGAGAAAATGATGAAAGAGAAAGAGGATGATATGTTGGACTTGGGAGAGGAGAAGAGGGAGGTCATCCGGCAACTGTGTTTGTGGATTGATTATCATCGCAGTCGCTATGACTATCTCAAGGACATTCTGTCAAAGACTCGCAGGGGCCAAAGAGCAGCATAA 4839 0.4057 MVKHRLRESIKSLFGSHIDSNKEEQLQVAKADIEDKVKEILKLIKNDNLEEDGTPVQLSKREPLIELIEDFHNQYQSLYAQYDHLTGDLRKRINGKRENGSSSSSSDSDSDSDYSSKDKGNKNGQLENEFQKTIDGLKQELEVVHVEVDELNRKLTISHEEKEDLNSKYLAALSKIQEADTVNMDLKSDAEALDAQRSKLFVENAELNKQVDKIEAELGQRLEELNIEKNSLTMEKETALQQIEEEKKITNGLRTLIDQLKEEKLTLGKELEAVTGELSNVKQQLEHAEQKMTDTSHNLKVAEEENETLKAQLSQASNEVQLGQSRIQEFVAESSQLKEKLDESGRGISAFTQMHEGFQKESSNRIRELEAQITKLESELESLQNQKRDTEEQMKSSTTEARELGEHNSVLQNQISQLDLKSREREEELSAMVKKLEDNENESSSKMSDLTSQINKLPVDIGTLHTQKNELEEQIIFKSNEASTQVESITNEVNALQQEVTSLQQQKSDLEAQLVEKVHENSKNVIEMQTLKEEIDRKILEQEKLLEDRENLAMQLRTLESEINTIQNKNSEAEEQIRAKSHEISHMKQGMLELHDKIAEIEKISTDRESNLLILQDKFISTEQAVSAQIMASSEQIKNLEHDLESLQKEKHEFEQQCENLRSEVDSIQNQKSEVEEKMRTKDHQNSGLREEILGLQGTIAVLEKTLAEKEAELSSLQEKLHEKESEASGQITHFTVQIDNLKHDLVSLQSEKQEAEQQCMKLKMELDSTQNQKVEVEEQMRAKDQENTELREENFGLQGTITALQKTLAEKEAELSTSQEKLHEKESEASGQITSFTLQTENLKHDLVSLQNEKQEIEQRCEKLKMELDSSQNQKGEVEEQIRAKDHENYELREEILGLEGKITSLEKTLDEKESTLSTLQENLQQKDSEASGQITAFTGQIDNLKHDLVSLQNEKQELEQQCEKLKMEVYSTQNQKGEVEEQIRAKDHENYELREEILGLEGKITALEKTLDEKESELSTLQEKLDEKESEASGQVIAFTAQIDNLKHDLVSLRNEKQELEQQCEKLKMEVDSTQNQKGEVEEQTRAKDHENSKLREEILRLEGTITALEKTLAEKESELSTLQEKLDEKESAASGQVIAFTAQIDNLKHDLVSLRNEKQELEQQCEKLKMEVDSTQNQKGEVEEQTRAKDHENSKLREEILRLEGTITEQEKTLAEKESELSTLQEKLDEKESEASGQVIAFTAQIDNLQKDLLSLQKTKEELELHYEKISEEHAESLVMVENEKNDISSRTIDLKRTLEEREGSYQRLNEEYKQIDGLVQEYMVKLEAAEKKIEEMAGEFHEGIELKDQKVADLEHTVGDLKRDLEEKGDEISTLLDDVRMLEVKLRLSNQKLRVTEQLLSEKEESFRKTEEKFQQDQRALEDKTASLSAIITANSEALDEIVSNVRECVNSVMTAIEIVSCRVSDDCKNYEECVSNISRELEVAKGQVREMNMEKEQLKRDKRKLLEQLQVKNEEEVALRKKVEKLEAKTNREESEKMNLTTTVVQLKKTVRELEKMMKEKEDDMLDLGEEKREVIRQLCLWIDYHRSRYDYLKDILSKTRRGQRAA* 1613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03648 1612 Coils Coil 190 326 - -
Lapu3g03648 1612 Coils Coil 936 977 - -
Lapu3g03648 1612 Coils Coil 1140 1188 - -
Lapu3g03648 1612 MobiDBLite consensus disorder prediction 380 402 - -
Lapu3g03648 1612 Coils Coil 897 931 - -
Lapu3g03648 1612 Coils Coil 630 685 - -
Lapu3g03648 1612 Gene3D - 652 855 - -
Lapu3g03648 1612 Gene3D - 359 542 - -
Lapu3g03648 1612 Gene3D - 1063 1195 - -
Lapu3g03648 1612 Gene3D - 1281 1467 - -
Lapu3g03648 1612 Gene3D - 891 1062 - -
Lapu3g03648 1612 Coils Coil 1397 1417 - -
Lapu3g03648 1612 PANTHER COP1-INTERACTIVE PROTEIN 1 1057 1170 - -
Lapu3g03648 1612 MobiDBLite consensus disorder prediction 403 418 - -
Lapu3g03648 1612 Coils Coil 1479 1583 - -
Lapu3g03648 1612 Coils Coil 999 1033 - -
Lapu3g03648 1612 Coils Coil 359 400 - -
Lapu3g03648 1612 MobiDBLite consensus disorder prediction 380 423 - -
Lapu3g03648 1612 Coils Coil 802 829 - -
Lapu3g03648 1612 Coils Coil 479 520 - -
Lapu3g03648 1612 Coils Coil 1249 1279 - -
Lapu3g03648 1612 MobiDBLite consensus disorder prediction 1073 1094 - -
Lapu3g03648 1612 MobiDBLite consensus disorder prediction 814 829 - -
Lapu3g03648 1612 Coils Coil 1094 1135 - -
Lapu3g03648 1612 Coils Coil 739 794 - -
Lapu3g03648 1612 Coils Coil 528 583 - -
Lapu3g03648 1612 MobiDBLite consensus disorder prediction 812 831 - -
Lapu3g03648 1612 MobiDBLite consensus disorder prediction 1175 1196 - -
Lapu3g03648 1612 Pfam KIP1-like protein 14 83 IPR011684 GO:0003779
Lapu3g03648 1612 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 10 89 IPR011684 GO:0003779
Lapu3g03648 1612 Coils Coil 841 889 - -
Lapu3g03648 1612 Coils Coil 1196 1237 - -
Lapu3g03648 1612 MobiDBLite consensus disorder prediction 93 125 - -
Lapu3g03648 1612 Coils Coil 693 727 - -
Lapu3g03648 1612 Coils Coil 134 168 - -
Lapu3g03648 1612 MobiDBLite consensus disorder prediction 111 125 - -
Lapu3g03648 1612 Coils Coil 1355 1375 - -
Lapu3g03648 1612 Coils Coil 1038 1086 - -
Lapu3g03648 1612 Coils Coil 422 453 - -
Lapu3g03648 1612 Coils Coil 1323 1343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g03648 Lapu-Chr3 59950963 59958728 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g03648 - - gmx:100778046 1626.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g03648 3 59950963 59958728 Lapu3g03648 3 59950963 59958728 ECH