Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03615 ATGCCTGCAACAACAGAGAATAACCAAGGCTCATTCCTGGGCCGAATAAGCATCCGAAGAAACCAAGTGATGTCCATGGACGGTACCCACGACCAAGAAATGGAAGACCTCGAACTTTTTCAGAAGCACGTAGGAGACCGCTTCTCCGAACTCTTGTCCACCACCACGGAGGACTCCTCCGGCGACCCCCTCCTCTCCATCTCCTGGCTCCGCCGTCTCCTCGACGAGTTCCTCTGCTGCGAGGCCGAGTTCAAAGCCGTCGTGCTCATGGGCCGCGACCCCTCCCAGATCGCCAAGCCTCCGCTCGACAAGCTCCTCCCGGAGTTCCTCGACCGCGTCGTCAAATCCCTCGACGTCTGCAACGCCGTCGCGCTCGGCCTCGACGCCGTCAAGAACCTCCAGCGCCTCGGCGAGATCGTCGTTTCCGCGCTCGACGTGACGCCGCTCGGCGACGGCCAGGTCCGCCGCGCGAAGAAGGCGCTCTCCGCCCTCATCGCCGCCATGATGCACGAGGACAACGCGAACGCGAAGGGGACCGAGCGCAGCCGGTCCTTCGGGCGGCGCACCGGGAACAACTCCAGCGCGAGCAGCAAGGACCGCGTGCGGTCGCTGTCGTGGACGATGGCGCGGAACTGGTCGGCGTCGAAACAGATCCACGCGATGATGTCGAATCTGGCTGCGCCTCGTGGCGCGGAGTCGACGGGATTGGCGCAGCCTCTTTACATAATGAGCACTGTGCTGGCGTTCGTGATGTGGGCTTTGGTGGCGGCGGTTCCATGCCAGGAGAGGAATGGGTTGGGGACGCACTTTCCCCTGCCGAGGCAACTGAGCTGGGCCCAGCCCATGATTGGGTTGCAGGAGAAGATTGCGGAGGAGTGGAAGAAGAAGGAGAAGAAGGGGAGCGTGGGGTTGTTGGAGGAGATGCAGAGGATGGAGAAGCTGGGGCAGTCGCTGATTGAGTTCGCCGAGTCGTTTCAGTTTCCCCCCGAAACGGAGCGTTTGGATGAGATGAAGAAAAACGTTGAGGAGTTGGGGGAGATTTGTAAAAGAATGGATGAAGGGTTGGAACCCATGCAGCAGCAGATTAGGGAGGTCTTTCACAGGGTTGTCAGGAGCAGGACCGAGTTTCTCGTTGTCTTGGACCAAGCTGGGAAGTTGTCTACACCCGCTGCTTAA 1176 0.6046 MPATTENNQGSFLGRISIRRNQVMSMDGTHDQEMEDLELFQKHVGDRFSELLSTTTEDSSGDPLLSISWLRRLLDEFLCCEAEFKAVVLMGRDPSQIAKPPLDKLLPEFLDRVVKSLDVCNAVALGLDAVKNLQRLGEIVVSALDVTPLGDGQVRRAKKALSALIAAMMHEDNANAKGTERSRSFGRRTGNNSSASSKDRVRSLSWTMARNWSASKQIHAMMSNLAAPRGAESTGLAQPLYIMSTVLAFVMWALVAAVPCQERNGLGTHFPLPRQLSWAQPMIGLQEKIAEEWKKKEKKGSVGLLEEMQRMEKLGQSLIEFAESFQFPPETERLDEMKKNVEELGEICKRMDEGLEPMQQQIREVFHRVVRSRTEFLVVLDQAGKLSTPAA* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03615 391 MobiDBLite consensus disorder prediction 175 200 - -
Lapu3g03615 391 Pfam Protein ROH1-like 6 379 IPR008511 -
Lapu3g03615 391 PANTHER BPS1-LIKE PROTEIN 16 379 - -
Lapu3g03615 391 MobiDBLite consensus disorder prediction 185 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g03615 Lapu-Chr3 59599767 59601139 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g03615 - - gmx:100817717 630.557
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g03615 3 59599767 59601139 Lapu3g03615 3 59599767 59601139 ECH