Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03610 ATGGGTGAGAAAGAGTCAGAGAAAGTAATTTGGGAACAGATGAGAACCCCTACGGCCACTCTCATTGCACCAACTGCACACCACCGAACCTTACCTAAGCTTTTAGTCATTATCATCCTCTTTGTCTCCGTCACTTACGTCGTCTACACGCTCAAGCTCATCTCAACCTCACGCGCATGCGACCACCACGTTTCATTCACCACCGAAACGGCCTCCGACGACCGGACGAACCTCCACCACGTGGTGTTCGGAATCGCCGCGTCGGCGAAGCTCTGGGAACAGAGGAAGAGCTACATCAAGCTCTGGTACCGTGCGCGGGAGATGCGCGGAGTGGTGTGGCTCGACGAGAAGGTGAAATCGGAGGAGGAGAGCGACGCGCTGCCGCCGGTGAGAATCTCCGGCGACACGGCGAGGTTCCGGTACACGAACAAGCAGGGGCACCGGTCCGCGATCAGGATCTCGCGGATCGTGGCGGAGACGCTGCGGCTGGGGATGAAGAATGTGCGGTGGTTCGTGATGGGCGACGACGACACTGTTTTCGTGACGGAAAACCTAATTCGCGTTCTGAGGAAATACGATCACAATCAGTTCTACTACATTGGGAGTTTATCGGAGAGTCACTTGCAGAACATTTACTTCTCTTACAACATGGCTTACGGCGGAGGAGGTTTTGCAATTAGTTACCCTCTCGCCGAGGCTCTCTACAAAATGCAGGACCGCTGCATTCAGCGTTATCCGGGTCTCTATGGCTCCGACGATAGAATGCAAGCGTGTATGGCCGAACTCGGTGTTCCACTCACCAAGGAAATCGGCTTTCACCAGTATGATGTGTATGGAAACCTGTTTGGCCTTCTTGCATCTCATCCCGTGACTCCATTGGTGTCACTGCACCACCTTGATGTGGTTGAGCCAATCTTCCCCAACGTGACCCAAGTAGAAGCCCTTCAACGGCTCACTATACCAATGAAGCTTGACTCAGCAGGGCTCATGCAGCAATCCATCTGCTACGACAAATCAAAAAGCTGGACTGTTTCCGTTTCGTGGGGTTTTGCTGTTCAGATATTTCGTGGTGTGTTTTCTCCTCGTGAGATGGAAATGCCTTCGAGAACATTCTTGAATTGGTACCGAAGAGCAGATTACACTGCATATGCATTCAACACCCGTCCAGTTAGCCGAAATCCATGCCAGAAGCCTTTTGTATTTTACTTTTCCAAGGCAAAATACAATTCTTCAATACAACAAATAGTGAGTGAATATGAAAGGCATCGTGTTCCTCACCCGGAATGCAGGTGGAAGATGGCTAATCCTGCTGCTCTTGACAAAGTGGAGGTATACAAGAAGCCAGATCCGTATCTATGGGATAGAGCTCCGAGGAGAAACTGTTGCAGAGTGAAGAGGTCGAAGGAGAAAGGGAAGATTGTGATAGATGTGGGTATGTGCAGAGAAGGTGAGGTAAGTGAGACATAA 1467 0.5078 MGEKESEKVIWEQMRTPTATLIAPTAHHRTLPKLLVIIILFVSVTYVVYTLKLISTSRACDHHVSFTTETASDDRTNLHHVVFGIAASAKLWEQRKSYIKLWYRAREMRGVVWLDEKVKSEEESDALPPVRISGDTARFRYTNKQGHRSAIRISRIVAETLRLGMKNVRWFVMGDDDTVFVTENLIRVLRKYDHNQFYYIGSLSESHLQNIYFSYNMAYGGGGFAISYPLAEALYKMQDRCIQRYPGLYGSDDRMQACMAELGVPLTKEIGFHQYDVYGNLFGLLASHPVTPLVSLHHLDVVEPIFPNVTQVEALQRLTIPMKLDSAGLMQQSICYDKSKSWTVSVSWGFAVQIFRGVFSPREMEMPSRTFLNWYRRADYTAYAFNTRPVSRNPCQKPFVFYFSKAKYNSSIQQIVSEYERHRVPHPECRWKMANPAALDKVEVYKKPDPYLWDRAPRRNCCRVKRSKEKGKIVIDVGMCREGEVSET* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03610 488 PANTHER FRINGE-RELATED 29 485 - -
Lapu3g03610 488 Gene3D - 68 325 - -
Lapu3g03610 488 FunFam Fringe-related protein-like 68 323 - -
Lapu3g03610 488 Pfam Protein of unknown function, DUF604 209 462 IPR006740 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g03610 Lapu-Chr3 59536797 59540613 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g03610 3 487 Glycosyltransferase AT4G23490 67.500 0.0 742
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g03610 - - gmx:100818244 901.738
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g03610 3 59536797 59540613 Lapu3g03610 3 59536797 59540613 ECH