Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03599 ATGGCACGGTTGGTTCTGCCATCGAAGAGATTCAGTCTTTCGAGGAACACTCTACTGGGTTTGATCTCCCCTGCTCCTCTTCAGCTTAATTGCAGTGTTGGTTATTTTCAGAATACAGCAAAAAGGAGCATCCGATACAAGCATTTCATTGCTTCAGAGGTTAATTTCCCACAGAAGTATTGCCCACTATATTCTTCAGTACCAAGGGTCAATCAAGTAAGTAGGCGGCTAATTTGTGCGGTTGCCACAGAGGATTTACCAAAGCAAGCTGAAGAATCTAAAATGGAGACACCAAGAGAAATATTCTTAAAGGATTATAAGATGCCTGATTACTACTTTGACACTGTGGATCTAAAATTTTCCTTGGGAGAGGAGAAGACAATAGTTGGTTCTAAAATTGCTGTGTATCCTCGCAGTGAAGGTTTTTCTCCCCCTCTAGTTTTAGATGGACAAGATGTATCTTTAGTTTCGATTCATCTGAATGGAAAGGCTTTGAAGGAGGAAGATTATCATTTGGATGCACGCCATCTCACAATCCAATCACCTCCTAGTGGTAAATATGATCTCGAAATTGTCACAGAGATTTATCCACAGAAAAACACATCATTAGAGGGACTTTACAAATCATCTGGGAATTTCTGTACTCAATGCGAAGCTGAAGGATTCCGTAAAATTACATTTTATCAGGATCGACCTGATATAATGGCAAAATATACAGTTCGCATTGAGGCTGATAAATCATTGTATCCAGTGTTATTGTCTAATGGAAACCTTGCTGAGCAAGGTGACCTGGAGGACGGGAGGCATTATGCTGTCTGGGAGGACCCCTTCAAGAAACCTTCTTACCTGTTTGCCTTGGTTGCTGGGCAATTACAGAGCAGAGATGACACATTTATTACGCGTTCAGGGCGGGAGGTGTCCCTTAGGATATGGACACCTGCAGAAGATGTACCTAAGACTGCACATGCTATGTATTCTCTGAAAGCAGCTATGAAGTGGGATGAAGATGTTTTTGGACTTGAATATGACTTGGATCTCTTCAATGTTGTTGCTGTCCCAGATTTTAACATGGGAGCCATGGAGAACAAGAGCTTGAATATTTTCAATTCAAAACTTGTATTGGCCTCTCCAGAAACTGCTACTGATGCAGATTATGCTGCAATATTGGGGGTTATTGGCCATGAGTATTTCCACAACTGGACAGGCAACAGAGTGACGTGTCGTGACTGGTTCCAGCTTAGCCTGAAAGAAGGTCTCACTGTTTTCCGTGATCAGGAATTTTCATCTGACATGGGAAGTCGTACTGTGAAGCGAATTGCTGACGTTTCTAATCTTAGAAATTACCAGTTTCCACAGGATGCTGGTCCCATGGCCCATCCAGTGCGACCACATTCTTATATCAAGATGGACAACTTCTACACAGTTTTTTCTCATGATCCTATGTATCAGGGTGCTGAAGTTGTCAGAATGTACAAAACCTTGTTAGGAAGCCAAGGGTTCCGAAAAGGCATGGATCTTTATTTTAAGAGACATGATGGTCAAGCTGTAACATGTGAAGATTTTTTCGCTGCCATGCGAGATGCAAATGATGCTGATTTTGCAAATTTCTTGCTTTGGTATTCTCAAGCTGGGACCCCTGTTGTCAAAGTAAACACTTCTTATAATTCAGAAGCACATACTTTTTCTTTGAAGATTAGTCAAGAGATACCGCCAACTCCAGGACAATCAGTTAAGGAACCCACGTTCATCCCTGTTGCAGTGGGTTTGCTTGATTCCTCTGGCAAGGACATTCCTCTTTCAAGTGTTTATCATAACGGGACTCTGCAATCTGCTTCTATCAATGATCAACCAGTCTGCACTACTGTCCTTAGAGTGACCAAGAAAGAGGAAGAGTTTCTATTCACTGATATATATGAGAGGCCTGTTCCTTCTTTGTTAAGAGGATACAGTGCTCCTGTTCGTCTGGAATCTGATCTAACTGAGAGCGACCTGTTTTTCCTCCTTGCCAATGATTCTGATGAATTCAACCGTTGGGAGGCTGGACAAGTTTTGGCACGGAAGTTGATGCTTAACTTGGTGGATGATTTTCAACATAACAAACCATTGGTTTTGAATCCCAATTTTGTTGATGGGTTCAAACGTATTCTATGTGATTCAAGTCTGGACAAAGAATTTGTGGCAAAGGCAATAACTCTGCCTGGGGAGGGGGAAATAATGGACATGATGCGGGTTGCAGATCCAGATGCTGTTCATGCTGTTCGGAGTTTCATCAGGAATCGGCTTGCAAGTGAACTGAGATCAGAGTTCCTCAGCACAGTAGAAAATAATAGGAGCACAGAAGAATATGTCTTCAATCACTCAAACTTGGCCAGGCGTGCTCTGAAGAATATTGCTCTTGCTTATCTTGGAAGCCTTAAGGAACAAGAATTCACCGATCTTGCTCTGCTAGAGTACAAATCTGCTACAAATATGACTGAACAATTTGCTGCTTTGGCTGCCATAGCCCAGAACCCCGGTAAAACCCGTGATGATGCTCTAGCTGACTTTTATGGAATGTGGCAACATGATTTCTTGGTGGTGAACAAATGGTTTGCTCTGCAAGCAACGTCTGACATTCCTGGTAATGTTGAGAATGTGCGGAAACTATTAAACCACCCAGCATTTGACCTGCGCAATCCCAACAAAGTGTACTCTCTCATTGGAGGTTTTTGTGGGTCTCCGGTCAACTTTCATGCAAAGGATGGATCTGGCTACAAGTTTTTGGGAGAAATTGTGCTGCAACTTGACAAGCTAAATCCTCAGGTAGCCTCAAGAATGGTGTCAGCCTTCTCAAGATGGAAGCGTTATGACGAAGACAGACAAAAGCTTGCAAAGGCTCAGTTGGAAATAATCATGTCTAGTAATGGACTATCGGAGAATGTGTTTGAGATAGCCTCGAAAAGCTTGGCTGCTTAA 2955 0.4247 MARLVLPSKRFSLSRNTLLGLISPAPLQLNCSVGYFQNTAKRSIRYKHFIASEVNFPQKYCPLYSSVPRVNQVSRRLICAVATEDLPKQAEESKMETPREIFLKDYKMPDYYFDTVDLKFSLGEEKTIVGSKIAVYPRSEGFSPPLVLDGQDVSLVSIHLNGKALKEEDYHLDARHLTIQSPPSGKYDLEIVTEIYPQKNTSLEGLYKSSGNFCTQCEAEGFRKITFYQDRPDIMAKYTVRIEADKSLYPVLLSNGNLAEQGDLEDGRHYAVWEDPFKKPSYLFALVAGQLQSRDDTFITRSGREVSLRIWTPAEDVPKTAHAMYSLKAAMKWDEDVFGLEYDLDLFNVVAVPDFNMGAMENKSLNIFNSKLVLASPETATDADYAAILGVIGHEYFHNWTGNRVTCRDWFQLSLKEGLTVFRDQEFSSDMGSRTVKRIADVSNLRNYQFPQDAGPMAHPVRPHSYIKMDNFYTVFSHDPMYQGAEVVRMYKTLLGSQGFRKGMDLYFKRHDGQAVTCEDFFAAMRDANDADFANFLLWYSQAGTPVVKVNTSYNSEAHTFSLKISQEIPPTPGQSVKEPTFIPVAVGLLDSSGKDIPLSSVYHNGTLQSASINDQPVCTTVLRVTKKEEEFLFTDIYERPVPSLLRGYSAPVRLESDLTESDLFFLLANDSDEFNRWEAGQVLARKLMLNLVDDFQHNKPLVLNPNFVDGFKRILCDSSLDKEFVAKAITLPGEGEIMDMMRVADPDAVHAVRSFIRNRLASELRSEFLSTVENNRSTEEYVFNHSNLARRALKNIALAYLGSLKEQEFTDLALLEYKSATNMTEQFAALAAIAQNPGKTRDDALADFYGMWQHDFLVVNKWFALQATSDIPGNVENVRKLLNHPAFDLRNPNKVYSLIGGFCGSPVNFHAKDGSGYKFLGEIVLQLDKLNPQVASRMVSAFSRWKRYDEDRQKLAKAQLEIIMSSNGLSENVFEIASKSLAA* 985
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03599 984 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 301 551 - -
Lapu3g03599 984 FunFam Putative aminopeptidase N 293 376 - -
Lapu3g03599 984 CDD M1_APN 105 541 - -
Lapu3g03599 984 SUPERFAMILY Leukotriene A4 hydrolase N-terminal domain 98 289 IPR042097 -
Lapu3g03599 984 FunFam Puromycin-sensitive aminopeptidase 659 983 - -
Lapu3g03599 984 Pfam Domain of unknown function (DUF3458_C) ARM repeats 662 983 IPR024601 -
Lapu3g03599 984 Pfam Domain of unknown function (DUF3458) Ig-like fold 544 657 IPR035414 -
Lapu3g03599 984 Pfam Peptidase M1 N-terminal domain 145 283 IPR045357 -
Lapu3g03599 984 Pfam Peptidase family M1 domain 325 536 IPR014782 GO:0008237|GO:0008270
Lapu3g03599 984 Gene3D Neutral Protease Domain 2 377 543 IPR027268 -
Lapu3g03599 984 Gene3D - 292 376 - -
Lapu3g03599 984 Gene3D tricorn interacting facor f3 domain 108 291 IPR042097 -
Lapu3g03599 984 FunFam Aminopeptidase N 377 543 - -
Lapu3g03599 984 Gene3D - 544 657 IPR038438 -
Lapu3g03599 984 PANTHER PUROMYCIN-SENSITIVE AMINOPEPTIDASE 93 984 IPR012779 GO:0008270
Lapu3g03599 984 NCBIfam aminopeptidase N 105 982 IPR012779 GO:0008270
Lapu3g03599 984 Gene3D - 659 983 IPR037144 -
Lapu3g03599 984 FunFam Aminopeptidase N 544 658 - -
Lapu3g03599 984 FunFam Aminopeptidase N 108 291 - -
Lapu3g03599 984 PRINTS Membrane alanyl dipeptidase (M1) family signature 391 406 IPR001930 GO:0006508
Lapu3g03599 984 PRINTS Membrane alanyl dipeptidase (M1) family signature 273 288 IPR001930 GO:0006508
Lapu3g03599 984 PRINTS Membrane alanyl dipeptidase (M1) family signature 410 422 IPR001930 GO:0006508
Lapu3g03599 984 PRINTS Membrane alanyl dipeptidase (M1) family signature 355 365 IPR001930 GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g03599 Lapu-Chr3 59387885 59397680 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g03599 K01256 - gmx:100775476 1818.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g03599 3 59387885 59397680 Lapu3g03599 3 59387885 59397680 ECH