Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03598 ATGAGAGGAACTAATGGGACTGATGCTACCAACACTTTCGACACTATAAACGCTGCTGCCTTTGCCATAGCCTCTGCTTCCCACAACCGCGTTTCTCAACCTCCTACCCAGAAGAAAAGATGGGGAAGCTGGTTCAGCAAAATTGGGTGTTTTGGATATCAAAGAAACAGAAAGCGCATTGGACATGCGATCCTTGTTCCAGAAACAACCCCCAATGGAGCAGATCATGCTGCAGCTGTTAGTTCAACACAAGCACCAAGCATAACACTCCCCTTCGCTGCCCCTCCCTCATCTCCTGCATCTTTCTTTCAATCAGAACCTCCCTCAACTGCACACTCACCAGTTGGTAAAATTTCTCACACTTGTGTGTCTGCCAGCATGTACTCTCCTGGTGGTCCTGCCTCAATCTTTGCCATTGGCCCTTTTGCTCATGAAACCCAGTTAGTATCACCACCTGTTTTCTCAGCTTCGTCCACCGCTCCTTTCACTCCACCTCCTGAATCTGTCCACTTGACCACGCCTTCTTCGCCTGAGGTTCCATTTGCTCAGCTTCTTGACCCCAAGAATAGGAATGGTGAGACCTTTCAGCGCTTCCAAATATCTCACTATGACTTTCAGTCCTATCAGTTTCACCCAGGAAGTCCAGTTGGTCAACTCATATCACCAAGATCCGCCATCTCTGCTTCGGGCACCTCATCGCCACTCCCTGACTCCGAATTTAGTGCCACTCTCTCCCATATCCTTGATTTCCAAAGAGCAGACCCTCCCAAGCTTCTCAACTTAGATAAACTGTCTGCTTATCAAAACAGGAAGCCAAACCAAGGTTCCGGCTCTCTGACCCCTGATGCTGCAAGGTCCACAAATCAAGCTGGTTATCTTTCAAATCATTGGGTTTCCGAGATCAAAATGTCCCCACGTCCAAGCAATAATCGAGTCAATGAGATTGGTATAAATCACAGAGTTTCATTTGAAATATCTACCCAGAAAGTTTTGGAATCTCTAGAAAACAAGCCGGCAGCATCAGCATGGACTAAGGTCGTGTCAAAATTGAAAAATGATGCACCAACAGCAGCAGACAAAGAAGAAAATTTAGGAGAAACCGGGTGCAGTGAGAAACAAGTACTTGCTGAAACTCACAATGATCAACCACTGGAAACCAGTTTGAGTGGAGATGATGCAACAGTTCAAGAGAAGGATCAGTCCTTAACACTTTCTTCTGCTAAAGAATTCAATTTTGATAATGCAGATGGAGGAGATTCTCTTGCTCCCAATATAGTTGCTGACTGGTGGGCTAATGAAAAAGTTGCAGGGAAGGAGAGAGGGGCAACCAAGGATTGGTCCTTTTTCCCAATGATTCAACCTGGTGTCAGCTAA 1374 0.4607 MRGTNGTDATNTFDTINAAAFAIASASHNRVSQPPTQKKRWGSWFSKIGCFGYQRNRKRIGHAILVPETTPNGADHAAAVSSTQAPSITLPFAAPPSSPASFFQSEPPSTAHSPVGKISHTCVSASMYSPGGPASIFAIGPFAHETQLVSPPVFSASSTAPFTPPPESVHLTTPSSPEVPFAQLLDPKNRNGETFQRFQISHYDFQSYQFHPGSPVGQLISPRSAISASGTSSPLPDSEFSATLSHILDFQRADPPKLLNLDKLSAYQNRKPNQGSGSLTPDAARSTNQAGYLSNHWVSEIKMSPRPSNNRVNEIGINHRVSFEISTQKVLESLENKPAASAWTKVVSKLKNDAPTAADKEENLGETGCSEKQVLAETHNDQPLETSLSGDDATVQEKDQSLTLSSAKEFNFDNADGGDSLAPNIVADWWANEKVAGKERGATKDWSFFPMIQPGVS* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03598 457 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE 1 457 IPR040420 -
Lapu3g03598 457 MobiDBLite consensus disorder prediction 157 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g03598 Lapu-Chr3 59377665 59380623 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g03598 - - gmx:100791666 735.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g03598 3 59377665 59380623 Lapu3g03598 3 59377665 59380623 ECH