Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03597 ATGCCACCTTTTGCAGGTTCTGAACCAGTTGGGTTCCCCAAGCTCGATTCCAACATAGTTTCCATAGACGTGGGAGGCCAAGTGTTCCAAACCACCAAACAGACACTAACCTCGGCGGGTCCAAAGACCTTCTTCTCGAGAATTGCGGAATCTTCTGGAATCTACACACCGTTCATAGACAGAGACCCGGAACTGTTCTCGCTCCTGCTCTCTCTCCTCCGCACCGGAAACCTTCCCTCAAAGGCCAAAGCTTTCGATCTCCAAGACCTAATTATTGAGTCAAAATTCTACGGCATCGAAACCCTCCTCATCAATTCCCTCTCCAACCCTTCTCAATTGGAACCCTTCAACCTCCAAAAATCCCTCCTTTTGCCCCTCAACGGCCGGGACTCCCCATCCGCCCTCGCCGCAGATTCCGCCTGCGGCGCCCTCCACGTCGCGCACGGCAGCAAAATCACCTCCTTCGACTGGTCCCTTCGCCGTAAGGCCACCGTCCTCACCCACTTCACCGCCGTCGACTCCCTCCTCGCGCTCTCGCCAGAGGTGGTGGCCGCCGGCGCCAATGACTTCTCCGGCCTTCAGATCCTGGACCTCGAAAACGGCCGGGTCAGGGAAACCCTAAACTGGGAAAACGTCACGAAATCCGGGTCCACCGTCCAAGCCATCGGATCCTCCACGGAAAACATGTTCGTCAGCTTCGAATCCTCGCGCCGAAACTCCAATTCCATAATGGTTTACGATTTACATACCCTGACACCCGTCACCGAGATCGGTCACAACGAAATCTTCGGCGCAGACATCGATTCAGCGATTCCCGCGACGAAGTTGCAGTGGATGGAGAGTTACAATTTGCTGATGGCGTCTGGGTCCCACAGTGGGCCCTCCGGCGTGTCCGGTAACATACGGTTGTGGGATGTTCGATCCGGTAATGTTGTCTGGGAGATTTCAGAAAAGGTGGATTGTTTTGCTGACGTGGCGGCTTGCGATGGGTTGTCGGTTATTTTTAAGGTTGGGGTGAATTCGGGTGAAGCATCGTACTTGGACATGCGGAATTTGAGCGATGAGAGCGCGTGGGTTTGTCTTGGGGATAAAAGAAAGGTCATAAACAATGGGAAGAAGGAAGGGTTTGGGAGCAAGATCCAAACGCAGGGGAATCAAGTGTTTTGCACCAAGGGTGGTGACGTGGAGCTCTGGTCTGAGGTTGTAATGGGGTCTGGGAATGGTGGCAGGATCTTCAAGAAGAACTTGATGGGTAGGATGGGGGACATGGGTGGGCCAAAGATCACCAATTTGGCCTTTGGAGGAAGCACCATGTTCTTGACTAGGAAGGATCAGCAATGTGTTGAGATCTGGCAGAGTTCTTCAAGGGAATTTTGA 1377 0.5338 MPPFAGSEPVGFPKLDSNIVSIDVGGQVFQTTKQTLTSAGPKTFFSRIAESSGIYTPFIDRDPELFSLLLSLLRTGNLPSKAKAFDLQDLIIESKFYGIETLLINSLSNPSQLEPFNLQKSLLLPLNGRDSPSALAADSACGALHVAHGSKITSFDWSLRRKATVLTHFTAVDSLLALSPEVVAAGANDFSGLQILDLENGRVRETLNWENVTKSGSTVQAIGSSTENMFVSFESSRRNSNSIMVYDLHTLTPVTEIGHNEIFGADIDSAIPATKLQWMESYNLLMASGSHSGPSGVSGNIRLWDVRSGNVVWEISEKVDCFADVAACDGLSVIFKVGVNSGEASYLDMRNLSDESAWVCLGDKRKVINNGKKEGFGSKIQTQGNQVFCTKGGDVELWSEVVMGSGNGGRIFKKNLMGRMGDMGGPKITNLAFGGSTMFLTRKDQQCVEIWQSSSREF* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03597 458 Gene3D Potassium Channel Kv1.1; Chain A 13 114 IPR011333 -
Lapu3g03597 458 PANTHER BTB/POZ DOMAIN-CONTAINING ADAPTER FOR CUL3-MEDIATED RHOA DEGRADATION PROTEIN FAMILY MEMBER 16 455 IPR045068 -
Lapu3g03597 458 Pfam BTB/POZ domain 20 106 IPR003131 GO:0051260
Lapu3g03597 458 SMART BTB_4 18 114 IPR000210 GO:0005515
Lapu3g03597 458 SUPERFAMILY POZ domain 17 104 IPR011333 -
Lapu3g03597 458 Gene3D - 135 458 IPR015943 GO:0005515
Lapu3g03597 458 SUPERFAMILY WD40 repeat-like 133 350 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g03597 Lapu-Chr3 59374138 59375514 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g03597 - - gmx:100792189 806.594
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g03597 3 59374138 59375514 Lapu3g03597 3 59374138 59375514 ECH