Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03579 ATGCTTTCTTCTTCAACCACTCGCATCTTCACCCGCATAACAACTTCTATAAGATTAGCTTCTTCCACCTCTTTTTCTTCTTCTTCTCTTCAATTCTACTCCAACCCTACCCTCTTCCGTCCTGTTCTTCACGCTTCTTTCAAACCGCTTCCTTCAACTCCGACCACCTCTTTGTTTTCCTCCTTGAGAACAGATCACACTATGGCCACCTCAAGCGCCAAATCAGTCCACGATTTCACCGTTAAAGATGCTAAGGGAAATAATATTAATCTTGGTGACTACAAAGGAAAGGTCCTTATCATTGTCAACGTTGCCTCGCAATGTGGCTTGACTAATTCGAATTACACAGAGCTGAGTCAGTTGTACGAGAAATACAAACAAAAAGGTCTGGAGATTCTAGCTTTCCCATGCAATCAGTTTGGGGCACAGGAGCCTGGATCTAATGAACAGATACAAGAGTTTGTTTGTACTCGCTTCAAGGCTGAGTTTCCCGTTTTTGACAAGGTTGATGTGAATGGTGACAAGGCTGATCCACTCTACAAGTATCTAAAATCAAGCAAAGGTGGACTCTTCGGGGATAATATCAAATGGAACTTCTCCAAGTTCCTTGTTGACAAGGAGGGTAAGGTTGTTGATCGCTATGCACCCACAACTTCTCCTCTGAGCATTGAGAAGGACTTGGTGAAGTTGTTGGATAGGGAAATTAGACTAATTTTACTTAAGTACGAGGGTCAAATAAAAAAGCATTGTTTTTGA 756 0.4206 MLSSSTTRIFTRITTSIRLASSTSFSSSSLQFYSNPTLFRPVLHASFKPLPSTPTTSLFSSLRTDHTMATSSAKSVHDFTVKDAKGNNINLGDYKGKVLIIVNVASQCGLTNSNYTELSQLYEKYKQKGLEILAFPCNQFGAQEPGSNEQIQEFVCTRFKAEFPVFDKVDVNGDKADPLYKYLKSSKGGLFGDNIKWNFSKFLVDKEGKVVDRYAPTTSPLSIEKDLVKLLDREIRLILLKYEGQIKKHCF* 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03579 251 ProSitePatterns Glutathione peroxidases signature 2. 133 140 IPR029760 -
Lapu3g03579 251 FunFam Glutathione peroxidase 67 233 - -
Lapu3g03579 251 SUPERFAMILY Thioredoxin-like 75 232 IPR036249 -
Lapu3g03579 251 ProSitePatterns Glutathione peroxidases active site. 96 111 IPR029759 -
Lapu3g03579 251 ProSiteProfiles Thioredoxin domain profile. 70 236 IPR013766 -
Lapu3g03579 251 ProSiteProfiles Glutathione peroxidase profile. 66 237 IPR000889 GO:0004602|GO:0006979
Lapu3g03579 251 PANTHER GLUTATHIONE PEROXIDASE 66 231 IPR000889 GO:0004602|GO:0006979
Lapu3g03579 251 CDD GSH_Peroxidase 75 227 IPR000889 GO:0004602|GO:0006979
Lapu3g03579 251 Gene3D Glutaredoxin 67 234 - -
Lapu3g03579 251 PRINTS Glutathione peroxidase family signature 94 111 IPR000889 GO:0004602|GO:0006979
Lapu3g03579 251 PRINTS Glutathione peroxidase family signature 195 204 IPR000889 GO:0004602|GO:0006979
Lapu3g03579 251 PRINTS Glutathione peroxidase family signature 130 146 IPR000889 GO:0004602|GO:0006979
Lapu3g03579 251 Pfam Glutathione peroxidase 76 184 IPR000889 GO:0004602|GO:0006979
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g03579 Lapu-Chr3 59176775 59183545 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g03579 K00432 - gmx:100306295 364.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g03579 3 59176775 59183545 Lapu3g03579 3 59176775 59183545 ECH