Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03578 ATGCTCTTTTCATTCACCATTACACTGACTCTGCAGCAAATTTTTTGCGTTCACTGGCAGGATACCAAAGGCGATGATGTGGATCTTGTCACTTACAAGGGAAAAGTATTGTTCATTGTTAATGTTGCTTCCAAATGTGGGATGACCAACTCAAATTATGTGGAGTTGAATCAACTATACGAGAAGTACAAAGACAAAGGGCTGGAGATTCTGGCATTTCCATGTAATCAATTTGGGGATGAAGAACCTGGAAGCAATGATCAAATTAAGGAGTTTGTCTGCACTCGCTTTAAATCTGAATTTCCCATCTTTGATAAGATTGAAGTGAATGGAGACAATTCTGCTCCTTTATATAAATTCTTGAAGTCAGGGAAGTGGGGAATTTTTGGAGATGATATTCAGTGGAACTTTGCCAAGTTTCTGGTTGACAAGGATGGGCAAGTGGTAGATCGCTATTATCCCACGACATCTCCTCTTAGCCTTGAGCGAGACATCTGTAAGCTACTTGGTAATGTATGA 519 0.3988 MLFSFTITLTLQQIFCVHWQDTKGDDVDLVTYKGKVLFIVNVASKCGMTNSNYVELNQLYEKYKDKGLEILAFPCNQFGDEEPGSNDQIKEFVCTRFKSEFPIFDKIEVNGDNSAPLYKFLKSGKWGIFGDDIQWNFAKFLVDKDGQVVDRYYPTTSPLSLERDICKLLGNV* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03578 172 PIRSF Glutathion_perox 2 171 IPR000889 GO:0004602|GO:0006979
Lapu3g03578 172 ProSitePatterns Glutathione peroxidases signature 2. 71 78 IPR029760 -
Lapu3g03578 172 Pfam Glutathione peroxidase 17 122 IPR000889 GO:0004602|GO:0006979
Lapu3g03578 172 ProSiteProfiles Glutathione peroxidase profile. 4 172 IPR000889 GO:0004602|GO:0006979
Lapu3g03578 172 PRINTS Glutathione peroxidase family signature 32 49 IPR000889 GO:0004602|GO:0006979
Lapu3g03578 172 PRINTS Glutathione peroxidase family signature 68 84 IPR000889 GO:0004602|GO:0006979
Lapu3g03578 172 PRINTS Glutathione peroxidase family signature 133 142 IPR000889 GO:0004602|GO:0006979
Lapu3g03578 172 ProSitePatterns Glutathione peroxidases active site. 34 49 IPR029759 -
Lapu3g03578 172 FunFam Glutathione peroxidase 7 171 - -
Lapu3g03578 172 Gene3D Glutaredoxin 9 170 - -
Lapu3g03578 172 PANTHER GLUTATHIONE PEROXIDASE 13 169 IPR000889 GO:0004602|GO:0006979
Lapu3g03578 172 CDD GSH_Peroxidase 20 165 IPR000889 GO:0004602|GO:0006979
Lapu3g03578 172 SUPERFAMILY Thioredoxin-like 17 169 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g03578 Lapu-Chr3 59176775 59183545 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g03578 K00432 - gmx:100808523 295.819
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g03578 3 59176775 59183545 Lapu3g03578 3 59176775 59183545 ECH