Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03574 ATGGAAGAAGACGGCAAAATAACAAAAGGAAAATATGCTGCTGATATTTCCTCTATAAAAGAAGCACATGCCCGAATCAAATCATTGGTTCATAAAACTCCGCTTCTGTCCTCCACCTCGTTGAATGTTATGTCAGGAAGGCAGCTCTACTTTAAGTGTGAATGTTTACAAAAGGGGGGAGCTTTTAAATTTAGAGGTGCCTGCAATGCCGTGTTCTCTCTCAATGATGAAGATGCTTCTAAAGGGGTTGTAACACACAGCAGCGGAAACCATGCTGCAGCATTGGCTTTGGCCGCTAAACTACGCGGGATCCCTTCATATATTGTTATTCCAAAAAATGCCCCAACTTGCAAAATTGAGAATGTAAAGCGCTATGGTGGACAGATTGTCTGGTCTGAGGTCTCTGTTCAATCCAGGGAAGAAGTTGCAAACAAAGTGTGGCAAGAAACTGGTGCCATCTTTATACATCCGTATAATGACGGACGCATATTAAGGTACAATGGCCAGGGTACCATATCGTTGGAGATTTTGGAGCAAGCCCCGCATATAGATACGCTAGTGGTACCCATAAGTGGTTGGTTCACTTTTTTGCAGTCAAGCTGTGGTGGTTTGATATCAGGAATAGCATTGGCTGCCAAGTCCATCAACCCAGCTATTCGTATTTTTGCTGCTGAACCTAAAGGGGCTGATGATGCAGCAAAATCTAAAGCAGCTGGGAGGATAATAAGATTGCCCGAGACAGATACTATAGCTGATGGTCTTCGAGCATTTCTAGGAGATTTCACATGGCCTGTAGTACGAGATCTTGTTGAGGACATTATAACTGTTGAAGACAGTGAGATAATAAAAGCTATGAAACTGTGTTTTGAAATTCTTAAGGTTGTTGTAGAACCAAGTGGAGCAATTGGCCTTGCTGCTGTTCTATCCGATACCTTCCAGAAGAATCCTTCTTGGAAGGAATGCAACCATATAGGAATAGTAATTTCAGGAGGCAATGTTGATCTGACTGTGCTTTGGGATTCTTTGAAGAAAGGAAAATGA 1041 0.4236 MEEDGKITKGKYAADISSIKEAHARIKSLVHKTPLLSSTSLNVMSGRQLYFKCECLQKGGAFKFRGACNAVFSLNDEDASKGVVTHSSGNHAAALALAAKLRGIPSYIVIPKNAPTCKIENVKRYGGQIVWSEVSVQSREEVANKVWQETGAIFIHPYNDGRILRYNGQGTISLEILEQAPHIDTLVVPISGWFTFLQSSCGGLISGIALAAKSINPAIRIFAAEPKGADDAAKSKAAGRIIRLPETDTIADGLRAFLGDFTWPVVRDLVEDIITVEDSEIIKAMKLCFEILKVVVEPSGAIGLAAVLSDTFQKNPSWKECNHIGIVISGGNVDLTVLWDSLKKGK* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03574 346 Gene3D - 62 158 IPR036052 -
Lapu3g03574 346 FunFam Threonine dehydratase catabolic 62 158 - -
Lapu3g03574 346 CDD Thr-dehyd 16 334 - -
Lapu3g03574 346 Gene3D - 25 334 IPR036052 -
Lapu3g03574 346 FunFam L-threonine dehydratase catabolic TdcB 159 334 - -
Lapu3g03574 346 ProSitePatterns Serine/threonine dehydratases pyridoxal-phosphate attachment site. 54 67 IPR000634 GO:0006520|GO:0030170
Lapu3g03574 346 Pfam Pyridoxal-phosphate dependent enzyme 29 328 IPR001926 -
Lapu3g03574 346 PANTHER SERINE / THREONINE RACEMASE FAMILY MEMBER 8 337 - -
Lapu3g03574 346 SUPERFAMILY Tryptophan synthase beta subunit-like PLP-dependent enzymes 16 337 IPR036052 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g03574 K12235 - gmx:100799758 590.112
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g03574 3 59146836 59149884 Lapu3g03574 3 59146836 59149884 ECH