Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03572 ATGGAGGAACCTCCAACTTCAGTTCCGGCGACAGCGTCATGCTGGAGCAACGTCGTGAAGAAGCAGCCACCTCCACCGCCGGTGCACAACGTTCCAGTACTGGTGGAAACCACCGAATCCTCCAATTCCATCTCCGTCGCCGTCGTGGACGCCAACGCAGTCATCGAATCCGGCGAAAAGCTCCACGGTCTCGCCGACAAGTTCATCTCCATCCCTGAAGTCTTGCACGAAATCCGTGACCCCGTTTCCCGCCACAAACTCTCTTTCCTCCCCTTCTCCATTCAAACCATGGAACCGTCCCCCGAATCCATCAATAAAGTTGTCAAATTTGCTAGGGCTACTGGTGACCTACAAACTCTCTCTGATGTTGATATCAAGCTCATAGCTCTGACTTACACGTTGGAGGCTCAAATTCATGGGACCAAACATCTCAGGGATGCACCTCCTCCTGTGCAAATGGTGAATGTGAAGAGGTTACCTGAGAAAGACATGCCGGGGTGGGGTTCTAATGTGCCTAATTTGCAAGAGTGGGAGGCGTTGGAACTGGCGGAAGACTCTATGAATTCCAATTCGAGAATCCTTCCTTTGCAGGATCTTAATTTGAACATTGTTTCTCCTGATGATCATTCTGTTGATGGTTCTGTGGAGAGAACGAGTGAAGCTGATTCGGGGATTCAGGAGGGTGGTGAGGATGGTTTTATGAAGCCTAGGAGATACATGCCTAAGAAAAAGGAGATAAACATCGAGGGGAAAACAATGGTGGCTGATGGAATTGATGCGTCGCAGGGTGAGTTTGATGACAATGCTGGTGATTGGATGCCGGCTGTCAGTCGGAGTACTCATAGGAGATACTTGAGAAGGAAAGCTAGACGGGAGTATTATGAGTCGATATCCAGTACTCAAGATGAGCAAGATTTGGAAGGAAAGGATGATGGTGTTGGTGAGGATGCTAGCGCTTTAAATCAACAAGATCATGAAAGGGAAGCTGAGCAACATGTTGAAAATGCTGTGTCTGGGGATAATCAGGTGGCTAAAGAGAACAAAGACAATGAAAGTATATATGAGATTCTTCAGCAAATGAGACTAGAAGAAGGTTCTCTTGAAGTTCTTGACGAGGAAAATAAACCAAGGTTATCTCCCGAAGAGCTCCTGTCAGACAATACTGGATTGGTGGAAACAGGACCTGATGGCAATGCAAATGTGGTCACTAAACCATGTGACAGTGAGATAGATACAGTTGATAGCCAATCAAATCACTTGGAGATTGCAAGCCAGACTAGTGAAGCTGCTGACTTTTCATACGCAGATGATGATGGTAGTGAGCAAAGTTGGATGGTTAGATCTTTGTCTGAATCAAATGTAGCATGTGTAACCGGTGACTTTGCAATGCAAAATGTTCTTCTCCAAATGGGTTTGCGCTTACTGGCACCTGGAGGAACACAGATACATCAGCTGCACAGATGGATACTCAAGTGTCATGCCTGTTACACTGTGACTGCTGAGATTGGGAGGATTTTCTGTCCAAAGTGTGGAAATGGTGGCACCCTAAGGAAGGTAGCTGTCACAGTTAATGAAAATGGAATAGTAGTTGCAGCCCGCCGACCGCGAGTTACATTACGTGGCACAAAGTTTTCATTGCCTTTACCCCAAGGTGGAAGGGATGCTGTTACAAAGAACCTCATTCTCCGTGAAGACCAACTTCCTCAAAGGGTGCTTTATCCTAAAACGAAGAAGAAAGCCGGCAAACAGGATGATGACTTCTTTACACCAGACAGTGTCTTCAGCCACCACACAGATAAGAAAGCTCCTTTCCAGCCTCCTATAAGGAAAGCAATGGCAGTTTTCGGTGGAAGGAGAAATCCAAATGACAATCACTACTCACGCTCCAAGCATAAGTAG 1899 0.4655 MEEPPTSVPATASCWSNVVKKQPPPPPVHNVPVLVETTESSNSISVAVVDANAVIESGEKLHGLADKFISIPEVLHEIRDPVSRHKLSFLPFSIQTMEPSPESINKVVKFARATGDLQTLSDVDIKLIALTYTLEAQIHGTKHLRDAPPPVQMVNVKRLPEKDMPGWGSNVPNLQEWEALELAEDSMNSNSRILPLQDLNLNIVSPDDHSVDGSVERTSEADSGIQEGGEDGFMKPRRYMPKKKEINIEGKTMVADGIDASQGEFDDNAGDWMPAVSRSTHRRYLRRKARREYYESISSTQDEQDLEGKDDGVGEDASALNQQDHEREAEQHVENAVSGDNQVAKENKDNESIYEILQQMRLEEGSLEVLDEENKPRLSPEELLSDNTGLVETGPDGNANVVTKPCDSEIDTVDSQSNHLEIASQTSEAADFSYADDDGSEQSWMVRSLSESNVACVTGDFAMQNVLLQMGLRLLAPGGTQIHQLHRWILKCHACYTVTAEIGRIFCPKCGNGGTLRKVAVTVNENGIVVAARRPRVTLRGTKFSLPLPQGGRDAVTKNLILREDQLPQRVLYPKTKKKAGKQDDDFFTPDSVFSHHTDKKAPFQPPIRKAMAVFGGRRNPNDNHYSRSKHK* 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03572 632 MobiDBLite consensus disorder prediction 210 236 - -
Lapu3g03572 632 Gene3D - 38 149 - -
Lapu3g03572 632 MobiDBLite consensus disorder prediction 295 334 - -
Lapu3g03572 632 Gene3D - 476 550 IPR036283 -
Lapu3g03572 632 FunFam 20S-pre-rRNA D-site endonuclease NOB1 38 158 - -
Lapu3g03572 632 SUPERFAMILY NOB1 zinc finger-like 482 545 IPR036283 -
Lapu3g03572 632 Pfam PIN domain of ribonuclease 48 134 IPR033411 -
Lapu3g03572 632 MobiDBLite consensus disorder prediction 578 604 - -
Lapu3g03572 632 CDD PIN_Nob1-like 48 159 IPR033411 -
Lapu3g03572 632 MobiDBLite consensus disorder prediction 295 348 - -
Lapu3g03572 632 MobiDBLite consensus disorder prediction 578 607 - -
Lapu3g03572 632 PANTHER RNA-BINDING PROTEIN NOB1 34 630 IPR039907 -
Lapu3g03572 632 Pfam Nin one binding (NOB1) Zn-ribbon like 482 552 IPR014881 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g03572 K11883 - gmx:100785714 1075.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g03572 3 59137756 59141339 Lapu3g03572 3 59137756 59141339 ECH