Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03570 ATGGCCAAGGTTTACCCTCAGTTACCCACATCTCCTCAGACTCAGTGTCTCACATCCAAAAGAGAAACATACACTCTATGGTTGAAATCACTTGTCTTCCACTCCAATGGATGCACTGTCTATGACTCAAATGGTGACATCGTTTATAGAGTTGACAACTATGACAGAAAGGGTAGAAGAGAAGTTAACCTCATGGATCTACGAGGCAAAGTTCTCTGCACCATAAAGAAGAGATTACTAGCTCTTGGATGTTGGGAAGGACACAGATGCATCAGTTCCGATTTTGGCACCCAGGAACAACCGTGGTTTCAAGTAAGAAGATGTAATCAAATGATCAAAGGGAAAGTAGCTTGCCAAATTTCTGTGGGGTGCCAAAAGTACAGCATAGTAAGAATCAGTGGCAAAGCAGAAGCCTTTAGAATCGTGAACATTGATGGACAAATAGTTGCAGAGGCAAAGCAAAAACACTCACCCTCAGGTGTTGTACTGAGTAACGATGTTCTAACGCTGGATTTGGCTGCTGGCACAGATCATTCTCTCATAATGGCTTTAATCACCGTTTATGGATTGATATGCGGTATAATGTAA 588 0.4218 MAKVYPQLPTSPQTQCLTSKRETYTLWLKSLVFHSNGCTVYDSNGDIVYRVDNYDRKGRREVNLMDLRGKVLCTIKKRLLALGCWEGHRCISSDFGTQEQPWFQVRRCNQMIKGKVACQISVGCQKYSIVRISGKAEAFRIVNIDGQIVAEAKQKHSPSGVVLSNDVLTLDLAAGTDHSLIMALITVYGLICGIM* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03570 195 SUPERFAMILY Tubby C-terminal domain-like 13 192 IPR025659 -
Lapu3g03570 195 PANTHER - 22 192 IPR007612 -
Lapu3g03570 195 Gene3D - 13 193 IPR038595 -
Lapu3g03570 195 Pfam LURP-one-related 12 187 IPR007612 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g03570 Lapu-Chr3 59120480 59121815 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g03570 - - pvu:PHAVU_002G287800g 391.349
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g03570 3 59120480 59121815 Lapu3g03570 3 59120480 59121815 ECH