Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03569 ATGTTCAGATGGAGGAGTGAGAGACACAAGGTCAAAGCTGTTTTCAAACTCCACTTCCATGTCACCCAGATGGTGCAATCTGGGGTGGAATCTTTGGTGTTATCTATTGTTCCAGGGGACATTGGAAAGGTAACTACGAGGTTAGAGAAAGCAGCAATTCGCGGTGGAGTTTGTAGATGGGAGAATCCTGTCCACGAAACAATCAAGCTTTTTCGGGAGCCTAAGACTGGGAAATTCAGTGAGAGAGTATACTATTTTGTGGTTTCAACGGGGTTATCAAAAGCTAGCTCCTTTGGGGAAGTTTCTGTAGACTTTGCTGAGTACGCTGAGGCTACGAAACCCTCCACTGTCTCTCTTCCCATCAAGAATTCTCATTGTGATGCCGTCTTGCATGTGTCAATCCAGAGGCTACAAGAAAATAATGATAACAGACAGGATGAGGATTGTGAAGATGCCAATCTGAAACCCAATGATAGAAGTTTGAGGACCTACTTGAGCAATGGAGAGATAGATGCAAGCTCGAAAAGTGATTCTTCTGAAGATGTGTCTGCCAAAGCAAATGCCAATGGAGCTGAATTGAGTGCTGATTGTAGGACATCTAGTGGATCTGACATTACAACGTTAAGTTCTGATGGAAGCTCTGGACTTGACACACCCCGAGAACTAGGACTAAGAAATGGTGGCATCCACCCCAACAACAATGGTTTTCTTTCAGACGTGAGCCACACATCTGATCCCCAAAAACCTGCTGTAAATGATATTCATCAGAGATCACACTGGGGTTGGTCAGCTGGTTCAGAACACAGTTTGAGTACGGATGGATCAACAAATGGTTCTCAGGATGCTCTTCCTAGGGAAAGATCTCATCAAGCATCTGATATGGAAATTGAAAGACTCAAGGCTGAACTTGCTGCTTTGACCAGGCAGGTAGATGTGTCAGACTTGGAACTGCAGACTCTAAGGAAGCAAATTGTAAAGGAAAGCAAAAGAGGACAGGAGCTCTCAAAGGAAATCATTTGCGTGAAAGAGGAAAGAGATGCACTCAAGATTGAATGTGACAATCTCAGATCTTTTCGTAAACAAATGGAGGGGGCCAAAGTGAGTAACAGGCCACCACTGGATAGTGGGGATCTTTGTACTCTTGTTGAAGAAATTAAACAAGAATTGAAGTATGAGAAGGAGCTGAATGCAAATCTCCAATTACAGTTAAAGAAGACACAAGACTCGAACGCTGAACTAGTTCTTGCTGTGCAGGACCTGGATGAAATGCTGGAGCAGAAAAATAGGGAAATATGTAGTCTTTCCAATAAGCACGAAGAGGGTAAAGGGGGAAAGCTCTCTAATTCTGAAACGGATGATGAACAGAAAGAATTGGAAGAGCTAGTTAAGGAGCATACCAATGCTCAGGAGACTCACTTACTTGAGCAAAAGATTATAGATCTCTATGGGGAAATAGAGATGTATAGGAGAGACAAAGATGAGTTAGAGATGCAGATGGAGCAGCTTGCACTAGACTATGAGATACTGAAACAGGAAAACCATGATATTGCATATAAGCTAGAACAAAGTGAACTGCAAGAACAATTAAAATTGCAGTATGAATGCTCGTCTCCTCCTCCTGCTGTTGATGAAATTGATGCCCATATTCAGAATCTGGAAAATCAACTCAAGCAACAGTCAGAAGAATTCTCAAATTCTCTGGCTACCATCAAGGATCTTGGAACCCAAATCAGCAGATTAGAGGAAGAACTGGAGAAACAAGCTCAAGGATTTGAAGCTGATCTAGACGCTTTGACACGTGCCAAAGTTGAGCAGGAGCAAAGGGCCATCCATGCAGAAGAAGCTTTGCGAAGCACCAGACTTAAAAACGCTAACACTGCTGAGAGGCTTCAAGAAGAATTTAGAAGGCTCTCAATGCAAATGGCCTCTACATTTGATGCCAATGAGAAGGCTGCCATGAGGGCATTGACAGAAGCAAGTGAACTTCGTGCACAGAAAAGGCTAGTGGAAGCAATGCTGCACAAAGTCAATGACGAGTTTCAGTCAGCCAAAGCTGATTATGAGGTAAAACTGGATGAACTTTCCAAAGAAATAGACATGATGGCAGCTCAGAAACAACAGATGTTGTCGGAAATTGAGGACAAGTCCAAGCAGCTCGAAAATCAGAAGAAGCGCGAGGAAGAAGTTAGTAGGGATTTCTTTGAAGAGATTCAAATGCTAAAAACTGAAAATGAAAGGCTTAATGTGGAGATTTCATGCCTCTCTGAGCAAGTAGAACAAAAAGATATCTTAAGAAATGAGTTGGAACTTATGAAGAAATCGCTTGAGGAATCTGACGCTCGGTTACAGAGTAGAACAGCGGAAAGATGTGAGCTGATGAGTGAAATTGCTTTCTTGAAAAAGGAAGCAGAAAGGTCACTTGATGAGCTCAATAGCATGAAACATCTCAATGATGAAAAAGAGATGGAGACTAGAGTCCTGCAGTCAGAGTTAGAAGAACTCAGAGCTCAATATAGTGACTTGAAAAGTGCTTGTTTTGAAGATGAAGTTGAGAAAGAAAATCTCAGAAAGCATGTTTTCCAGCTAAAGGGTGAACTTAAGAAGAAGGATGATGCATTAACCAACATTGAGAAGAGGTTCAAGGATAGCAATGGACGCACACAAGTTTCTGATGGAACTAAAACCAATTTAAAGAACAAAAAAGGTGCTTCAATTCCTCAGAGTGCAAAAGAAATGGCAAATCTGAGGGAGAAAATAAAGACGCTTGAGGGCATGATAAAGTCCAAGGAAACTGCTTTGGAAATGTCAGCTTCTTCATTTTTGGAGAAGGAAAGGGAGCTCCAATTCAAAATTGATGAACTGGAGGACAAAGTGGAGGAATTCAATCAGATCATTGCTTTGCAAAAGGTTGTTGGGGATAAGGCTATTACCACTTCAAATGATACTAATAGCGTCGCTGAGGAAAATGGTGTTGCTTTAACATTGTTCAAGAGTAATTTATATTTGTCGGAGAAAGAAGCAGAAATATCCACTATACAAAATAATGGAGATGGCAGTCTTTGTGAAACTTCAGCTGAATTATCGCTGTTGAAGGAAAGAAACAACTTAATGGAAACTGAGCTGAAAGAGTTACAACAAAGATACTCAGAAATGAGTCTCAAATTTGCAGAGGTAGAAGGTGAAAGACAAAAGCTTGTTATGACTGTACGAAACCTGAAGAATCGGAAGGCTCAATGA 3237 0.414 MFRWRSERHKVKAVFKLHFHVTQMVQSGVESLVLSIVPGDIGKVTTRLEKAAIRGGVCRWENPVHETIKLFREPKTGKFSERVYYFVVSTGLSKASSFGEVSVDFAEYAEATKPSTVSLPIKNSHCDAVLHVSIQRLQENNDNRQDEDCEDANLKPNDRSLRTYLSNGEIDASSKSDSSEDVSAKANANGAELSADCRTSSGSDITTLSSDGSSGLDTPRELGLRNGGIHPNNNGFLSDVSHTSDPQKPAVNDIHQRSHWGWSAGSEHSLSTDGSTNGSQDALPRERSHQASDMEIERLKAELAALTRQVDVSDLELQTLRKQIVKESKRGQELSKEIICVKEERDALKIECDNLRSFRKQMEGAKVSNRPPLDSGDLCTLVEEIKQELKYEKELNANLQLQLKKTQDSNAELVLAVQDLDEMLEQKNREICSLSNKHEEGKGGKLSNSETDDEQKELEELVKEHTNAQETHLLEQKIIDLYGEIEMYRRDKDELEMQMEQLALDYEILKQENHDIAYKLEQSELQEQLKLQYECSSPPPAVDEIDAHIQNLENQLKQQSEEFSNSLATIKDLGTQISRLEEELEKQAQGFEADLDALTRAKVEQEQRAIHAEEALRSTRLKNANTAERLQEEFRRLSMQMASTFDANEKAAMRALTEASELRAQKRLVEAMLHKVNDEFQSAKADYEVKLDELSKEIDMMAAQKQQMLSEIEDKSKQLENQKKREEEVSRDFFEEIQMLKTENERLNVEISCLSEQVEQKDILRNELELMKKSLEESDARLQSRTAERCELMSEIAFLKKEAERSLDELNSMKHLNDEKEMETRVLQSELEELRAQYSDLKSACFEDEVEKENLRKHVFQLKGELKKKDDALTNIEKRFKDSNGRTQVSDGTKTNLKNKKGASIPQSAKEMANLREKIKTLEGMIKSKETALEMSASSFLEKERELQFKIDELEDKVEEFNQIIALQKVVGDKAITTSNDTNSVAEENGVALTLFKSNLYLSEKEAEISTIQNNGDGSLCETSAELSLLKERNNLMETELKELQQRYSEMSLKFAEVEGERQKLVMTVRNLKNRKAQ* 1079
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03569 1078 Coils Coil 478 512 - -
Lapu3g03569 1078 Coils Coil 448 471 - -
Lapu3g03569 1078 Coils Coil 542 615 - -
Lapu3g03569 1078 Coils Coil 937 964 - -
Lapu3g03569 1078 Coils Coil 1027 1075 - -
Lapu3g03569 1078 MobiDBLite consensus disorder prediction 883 907 - -
Lapu3g03569 1078 MobiDBLite consensus disorder prediction 193 216 - -
Lapu3g03569 1078 Coils Coil 737 785 - -
Lapu3g03569 1078 ProSiteProfiles C2 NT-type domain profile. 3 138 IPR019448 -
Lapu3g03569 1078 MobiDBLite consensus disorder prediction 139 292 - -
Lapu3g03569 1078 MobiDBLite consensus disorder prediction 886 903 - -
Lapu3g03569 1078 Coils Coil 382 402 - -
Lapu3g03569 1078 MobiDBLite consensus disorder prediction 434 454 - -
Lapu3g03569 1078 Coils Coil 659 732 - -
Lapu3g03569 1078 PANTHER MYOSIN HEAVY CHAIN-RELATED PROTEIN 1 1076 - -
Lapu3g03569 1078 MobiDBLite consensus disorder prediction 231 251 - -
Lapu3g03569 1078 Coils Coil 410 430 - -
Lapu3g03569 1078 Coils Coil 796 844 - -
Lapu3g03569 1078 Coils Coil 912 932 - -
Lapu3g03569 1078 Coils Coil 289 337 - -
Lapu3g03569 1078 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 9 142 IPR019448 -
Lapu3g03569 1078 MobiDBLite consensus disorder prediction 262 285 - -
Lapu3g03569 1078 MobiDBLite consensus disorder prediction 140 157 - -
Lapu3g03569 1078 MobiDBLite consensus disorder prediction 159 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g03569 Lapu-Chr3 59110297 59115929 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g03569 - - gmx:100819574 1776.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g03569 3 59110297 59115929 Lapu3g03569 3 59110297 59115929 ECH
Lapu2g00274 2 2217305 2223145 Lapu3g03569 3 59110297 59115929 PCT