Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03540 ATGCCCGTTCGCCGTCTCAGACTCGATTCCGACACCGACGAAGAAGAACAACACCCACTCCAACCCCAACCCCAGCCACAGCCACAGCCACAGCCACAGCCACAACCACATTTTCCGGCCGTTCCCGTTGAAATCTCCGACGACGATGACGACTTCATCGACGTCGCCGAAAGCCTCTCTCCGCCCTCCCCTTCCTGTCCAGTCACCGACTTCTTCCGCCGCCTCGGACTGTCCCTCAAGAGAGACTGGCTCGACTCCTGTCTCCGCCAACTCCAAGCCTCCGTTACGTCCTTCGAACGCCTCGACGTTGCCGCCAAAGCCAAACGCTGTTTCGAGCAGTGCCTCTTCGCCGACATGAATTCATGCGGCGCCGGCGTTCTCCCTCCCAATGTCAATTCCATGCACCTCTGCGTTCTCCCTGGTCCCTACGTTTTACAGGTTGATGAAATAATTAATATCACTTGTCCTCTACGAGGCAGATATGAACAAGCACCTCCTGGATCTAAGAGGTGCCTCAAGTTGTCAATGACTGATGGTGTTCAGAGAGTCTTTGGAATGGAGTATAGGCCTATCAAAGCTCTTGAAGTTTGTGCCTCATCTGGTTTGAAGGTTGCTATCTCTAATGTACATGTTCGTCGTGGACTTCTAATGCTGGTCCCTGAAACCATTGAAATCTTGGGGGGATTGGTTGAGGAGCTGGATGCTGCTCGAAAGCGGCTGGTTGAAGAAATAAACAAGCCACCAAGGGGGAAAAGAAACAAAAATGGAGAGCTTCCTCCTTTAGCAACCAGAGCAACTCTTGCTGCATGGCCTCCAGGTGGAGTTGATAACCATGCGTGCAATGGCTCCACGCTGCACAGTACTGTTTCTTTCCAAGAAAACAACCAAGGTGCTGGCCGGAGCATACCTGGCACCGTCAACAGCTTAACAAATGAAGGTACTTTGCCCATGGGTGCACAAAGTGCTGCTTCTAATTCAATACCCTACATGTCATCAAATTCCGACGCCATGAATGTGGATACGCCCGGGAATACCAATTCTGTTTCCCATGCTAGTCCTATGGCTAACCACCTCTCCTCTGTAATCTCAAAGGCCGAGGAGATGCACATAGATGCTGCTAATGTCACCAGGGAATATTCTATTAACCATCAATCTTCTAACATGGATTCAAATGTTACAGTGACACATATTGACACGGTTAATATAACACGTGAAAGTTCTGTAATTATTGAGTGCTCTCCTGTTGTTGAAAGTGTTGAGACAGATACGGATAGAACTCCTGTTGCTACAGATACGACTCATCTGCAAAGAACCTCATCCACAGTTTTAAACACTAGAGATGTCCAGATGGTTGATGCCAGTGACCATCCACTCATACTGTCTGGAGACCAAGAGTTTCCTTTCACATACATAGCTAGTTTGTCAGCCAAGTGGGCTAAAATGAAGGAGGAAGCTCCTTCTGTTCAGGGTAAAATCAAGTGCTTTTTGACTGGCGTAAAAGGATTCCAGTATAAGAAAAGGACAACATATGAACTTCAGGCATATGTAGACGATGGTAGTCTTATTTCTGAAATCCTCGTAGATCATAATGTTGTAGAGAAAGGAATTGGTTATTCTCCTGAGGAGGTGACTGCGGCTCTTTCTTCTCCTGACACGAAAATTGTCCACCAAATGAAGGATACAATGCGTAAATTTCAAGCCTTTTTAGCAAACTTTGAGGGAATAATTCTTGTGGAATTAAATAAAAAATCTCCCCTTCCACTTGCTCTAGAAATGAGTCAAGGATGTCCTCAGTCTGATGCATGGTTACTTCTGAGAAGGCTGAAGTCTCTTCACCCTCCTCAAGTTCAAAACCCTACGGACCCAATTGAATTATCCCCGTAA 1884 0.4703 MPVRRLRLDSDTDEEEQHPLQPQPQPQPQPQPQPQPHFPAVPVEISDDDDDFIDVAESLSPPSPSCPVTDFFRRLGLSLKRDWLDSCLRQLQASVTSFERLDVAAKAKRCFEQCLFADMNSCGAGVLPPNVNSMHLCVLPGPYVLQVDEIINITCPLRGRYEQAPPGSKRCLKLSMTDGVQRVFGMEYRPIKALEVCASSGLKVAISNVHVRRGLLMLVPETIEILGGLVEELDAARKRLVEEINKPPRGKRNKNGELPPLATRATLAAWPPGGVDNHACNGSTLHSTVSFQENNQGAGRSIPGTVNSLTNEGTLPMGAQSAASNSIPYMSSNSDAMNVDTPGNTNSVSHASPMANHLSSVISKAEEMHIDAANVTREYSINHQSSNMDSNVTVTHIDTVNITRESSVIIECSPVVESVETDTDRTPVATDTTHLQRTSSTVLNTRDVQMVDASDHPLILSGDQEFPFTYIASLSAKWAKMKEEAPSVQGKIKCFLTGVKGFQYKKRTTYELQAYVDDGSLISEILVDHNVVEKGIGYSPEEVTAALSSPDTKIVHQMKDTMRKFQAFLANFEGIILVELNKKSPLPLALEMSQGCPQSDAWLLLRRLKSLHPPQVQNPTDPIELSP* 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03540 627 Pfam RecQ mediated genome instability protein 76 239 IPR013894 -
Lapu3g03540 627 MobiDBLite consensus disorder prediction 1 45 - -
Lapu3g03540 627 FunFam RecQ-mediated instability protein (DUF1767) 118 244 - -
Lapu3g03540 627 Pfam Recq-mediated genome instability protein 1, C-terminal OB-fold 467 608 IPR032199 GO:0000166
Lapu3g03540 627 MobiDBLite consensus disorder prediction 1 18 - -
Lapu3g03540 627 MobiDBLite consensus disorder prediction 21 39 - -
Lapu3g03540 627 PANTHER RECQ-MEDIATED GENOME INSTABILITY PROTEIN 1 RMI1 64 610 - -
Lapu3g03540 627 Gene3D - 118 244 IPR042470 -
Lapu3g03540 627 SMART DUF1767_2 69 162 IPR033472 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g03540 K10990 - gmx:100803734 830.861
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g03540 3 58824323 58828566 Lapu3g03540 3 58824323 58828566 ECH