Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03536 ATGGATGTTTACGTAAAAGAGGAAGTGTTGGAGACTCCGATTGTGACCGAGAGGAAGCCGCGAAACGGCGCCGTTTCGGTGCCTCCTCCCGGTTCAGTCATTGAGCTCAGTAGCAGCAGCAGCGACAGTGATTCCGAGGACGACGTTGATTTGGATGGTGTAGTCGCCAGCGCCCTGCGGAACGGAGGAAGTCCTTCGAAGAGGCGGAAGACCGGCGACGCCGGAGTGGTTTTGCCGGTTGGATTCCTCAGTCCGCTCCCTCCTGCGCCGGCGTCTCCACCGGCACCTTTGCTATCCCTGCCGGCGCCGGAGTGGGCTTCCAATTCGGCATCGGGATCCAACGCGTATACGAGACTGGGAGTGAATAGCAGCAAGCAGTTCTGGAAGGCTGGGGATTACGATGGTGCTCCATGCGGTGGTTCTGTATCTTCTTCAACAGTTGGTATGGATCATGTCAGAGTTCACCCCAAGTTTTTACACTCTAATGCCACAAGCCATAAATGGGCTCTTGGAGCTTTTGCTGAGCTTTTGGACAATTCATTGGATGAGGTTTGTAATGGGGCGACATATGTTAATGTAGATATGCTTATAAATAAGAAAGATGGCTCCAGGATGTTGCTGATTGAAGATAATGGTGGTGGGATGGATCCTGATAAAATGCGTCAATGCATGTCGTTGGGGTATTCTGTGAAAAGCAAATTGGCAAACACAATTGGACAATATGGAAATGGCTTTAAAACAAGTACCATGAGGCTAGGGGCTGATGTAATTGTATTCACCCGTTTTCCTGGGCAAGATGGGACAAGCTCTACTCAAAGCATAGGATTGCTGTCTTACACATTTTTGAGGAGTACGGGGAAGGAAGACATTGTAGTACCCATGTTGGACTATGAAAGAAGAGGACAGCAATGGAATAAGATAATACGATCTTCTCTGGATGATTGGAATAAAAATGTTGAAACAATGGTACAGTGGTCACCATTTTCTGATGAGGCTGATCTTCTTCGCCAGTTTAACTTGGTGAAAGATCATGGTACACGAGTAATTATATACAATCTTTGGGAGGATGATCAAGGTCAACTGGAACTTGATTTCAACGCTGATCCACATGATATCCAAATAAGAGGTGTAAATCGAGATGAGAAAAACATACAGATGGCTAAAGAGTTTCCCAATTCTCGGCATTTCTTGACCTATCGACATTCACTAAGGAGTTATGCTTCAATTTTATATCTTAGACTTCCTTCTGGGTTCCGAATTATTCTTCGAGGGGAAGATATTTTGCATCACAACATCGTGAATGATATGATGATGTCTCAGGAGGTGACCTACAGGCCTCAAGCTGGAGTTGATGGGCTTCTTCCAAAAGATTCAAATATGGTTGCTGTTGTTACTATTGGATTTGTCAAGGATGCAGTTCACCATGTTGATGTTTCGGGCTTTAATGTTTATCATAAAAATCGACTCATTAAGCCTTTCTGGAGGATCTGGAATCCAGCTGGAAGTGGAGGACGTGGGGTCATAGGTGTCTTGGAAGCCAATTTTGTTGAACCTGCTCACGATAAACAAGGGTTTGAGCGTACATTAGTTTTATCAAGACTGGAGTCTAAATTGATACAAATGCAGAAAAAATATTGGAGCACTAACTGCCATAAAATTGGTTATGCTTCCAATCGAAATAAAATACAAATCAGAGATTCTGCTGATAAAGATATATCTCCCGAATATGTTCCAGAACCATCACAATCAAAAAGGAAATATTCTACCATGGATGGCAAGACACCATTGACATCAGACAAATTGCATTCACAATCGAATCAAAGACGAATACAGCGGCAAACAGAAAAAGATAGTGCATTTATTAATGGCCAATCTCCTGTCTCTCCCGGACATATCATACAAAGTTCATCTGAACAATCATCCTCTGACGATGATGTCAGTGACGAAGTCTTGCCTAAGAGAACAACTCAGAAGACATCTACTGCTGAGAAGTCATTTGAAAATGAGAATGGAGACACCACATCAAATAGAAAAGCCTCACAGTACACACGGGCATACGCATCCAAGCTAAAGGGAAAAGATGCAAATGATGGCGAGCAACCACTATCTCACAGCGATTTACTGACACTCGAGCAATTAAAAAAGGAGAACCGTGAGTTGAAGGAAAGATTACAGAGGAAGGAGGAGGAAATTTTAGGAGAAATGTCTCAAGCTTTGCAGTGTGAGAAAGACAAGTGTAAATCTCTCCAAACTCAGCTAAATGAGGCAGAAAAAAAGATTGAAGAGTTGAACAATGATCAAGAAACTCTCATTGATGTATTCTCTGAAGAGAGGGATAGACGTGATGCTGAAGAGAAAAATCTGAGGAAGAAGCTTCAGGAAGCATCGAATACTATCCAAGAGCTGCTTGACAAGATAAGGATACTTGAAAGGAAGTCTACAAGTGGCAAACTAGAACGATAA 2463 0.4316 MDVYVKEEVLETPIVTERKPRNGAVSVPPPGSVIELSSSSSDSDSEDDVDLDGVVASALRNGGSPSKRRKTGDAGVVLPVGFLSPLPPAPASPPAPLLSLPAPEWASNSASGSNAYTRLGVNSSKQFWKAGDYDGAPCGGSVSSSTVGMDHVRVHPKFLHSNATSHKWALGAFAELLDNSLDEVCNGATYVNVDMLINKKDGSRMLLIEDNGGGMDPDKMRQCMSLGYSVKSKLANTIGQYGNGFKTSTMRLGADVIVFTRFPGQDGTSSTQSIGLLSYTFLRSTGKEDIVVPMLDYERRGQQWNKIIRSSLDDWNKNVETMVQWSPFSDEADLLRQFNLVKDHGTRVIIYNLWEDDQGQLELDFNADPHDIQIRGVNRDEKNIQMAKEFPNSRHFLTYRHSLRSYASILYLRLPSGFRIILRGEDILHHNIVNDMMMSQEVTYRPQAGVDGLLPKDSNMVAVVTIGFVKDAVHHVDVSGFNVYHKNRLIKPFWRIWNPAGSGGRGVIGVLEANFVEPAHDKQGFERTLVLSRLESKLIQMQKKYWSTNCHKIGYASNRNKIQIRDSADKDISPEYVPEPSQSKRKYSTMDGKTPLTSDKLHSQSNQRRIQRQTEKDSAFINGQSPVSPGHIIQSSSEQSSSDDDVSDEVLPKRTTQKTSTAEKSFENENGDTTSNRKASQYTRAYASKLKGKDANDGEQPLSHSDLLTLEQLKKENRELKERLQRKEEEILGEMSQALQCEKDKCKSLQTQLNEAEKKIEELNNDQETLIDVFSEERDRRDAEEKNLRKKLQEASNTIQELLDKIRILERKSTSGKLER* 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03536 820 MobiDBLite consensus disorder prediction 15 50 - -
Lapu3g03536 820 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 171 273 - -
Lapu3g03536 820 MobiDBLite consensus disorder prediction 565 681 - -
Lapu3g03536 820 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 171 361 IPR036890 -
Lapu3g03536 820 Coils Coil 739 773 - -
Lapu3g03536 820 Gene3D - 156 359 IPR036890 -
Lapu3g03536 820 Coils Coil 707 737 - -
Lapu3g03536 820 MobiDBLite consensus disorder prediction 653 681 - -
Lapu3g03536 820 Coils Coil 781 812 - -
Lapu3g03536 820 MobiDBLite consensus disorder prediction 616 641 - -
Lapu3g03536 820 FunFam MORC family CW-type zinc finger protein 4 155 359 - -
Lapu3g03536 820 MobiDBLite consensus disorder prediction 582 604 - -
Lapu3g03536 820 Pfam Morc6 ribosomal protein S5 domain 2-like 401 546 IPR041006 -
Lapu3g03536 820 PANTHER ZINC FINGER CW-TYPE COILED-COIL DOMAIN PROTEIN 3. 109 793 IPR045261 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g03536 Lapu-Chr3 58762962 58775608 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g03536 - - gmx:100786679 1279.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g03536 3 58762962 58775608 Lapu3g03536 3 58762962 58775608 ECH