Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03531 ATGGCCATGCATCGCGAGTCTTGGGCTTTTGTGTTCGGTCTTTTGGGCAACATCATCTCCTTTGGAGTGTTCCTTGCTCCATTGCCAACCTTTTACCAAATCTACAGGAGGAAATCCACTGAAGGGTTTCAGTCACTTCCTTATGTTGTTGCACTGTTCAGTGCAATGCTTTGGATTTACTATGCATTCGTGAAAAGGGAAGCTGCTCTCCTTCTCATTACCATTAACACGTTTGGAATTGTTGTGGAATCACTTTACCTGGCAGTCTTCCTATTATATGCTCCAAAGAAGCCTAGGCTTACGACCATCAAGCTTCTTCTCTTGCTGAATGTGTTTGGCTTCGGAGCCATGCTTCTGGCAACTCTCTACCTGTCGAAGGGAGCAAAGCGTCTTGCTATCATAGGATGGATTTGCCTTGTATTCAACATCAGTGTCTTTGCTGCACCTCTCTTCATTATTAGGCGAGTGATTCAGACAAGGAGCGTGGAATACATGCCATTTACTCTGTCCATGTTTTTAACCATCAATGCTGTTATGTGGTTTTTCTATGGTCTTCTCCTCAGGGATTATTATGTTGCTCTCCCAAACACACTTGGGTTTCTGTTCGGCATAATTCAGATGGTGATGTATTTGATATACAGAAACGCCACCCCAGTGACAATAGATGAGCCAGTGAAGGTTCAAGAATTGAATGGCCACATGGTTGACGCTGTGAAGATGGGAACAATGGACCCGAACCACGCAACTGCAGGTCTTGGTGCTGTTGGCAAAGTCTGA 777 0.4479 MAMHRESWAFVFGLLGNIISFGVFLAPLPTFYQIYRRKSTEGFQSLPYVVALFSAMLWIYYAFVKREAALLLITINTFGIVVESLYLAVFLLYAPKKPRLTTIKLLLLLNVFGFGAMLLATLYLSKGAKRLAIIGWICLVFNISVFAAPLFIIRRVIQTRSVEYMPFTLSMFLTINAVMWFFYGLLLRDYYVALPNTLGFLFGIIQMVMYLIYRNATPVTIDEPVKVQELNGHMVDAVKMGTMDPNHATAGLGAVGKV* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03531 258 Pfam Sugar efflux transporter for intercellular exchange 11 97 IPR004316 GO:0016020
Lapu3g03531 258 Pfam Sugar efflux transporter for intercellular exchange 133 216 IPR004316 GO:0016020
Lapu3g03531 258 Gene3D - 11 97 - -
Lapu3g03531 258 FunFam Bidirectional sugar transporter SWEET 130 222 - -
Lapu3g03531 258 Gene3D - 129 220 - -
Lapu3g03531 258 PANTHER RAG1-ACTIVATING PROTEIN 1 14 217 IPR047664 -
Lapu3g03531 258 FunFam Bidirectional sugar transporter SWEET 10 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g03531 Lapu-Chr3 58707529 58710159 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g03531 1 247 Miscellaneous Gene Families AT5G50790 53.629 4.23e-98 287
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g03531 K15382 - gmx:100810946 453.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g03531 3 58707529 58710159 Lapu3g03531 3 58707529 58710159 ECH
Lapu3g03531 3 58707529 58710159 Lapu9g00947 9 14683018 14685757 PCT