Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03529 ATGCCGCCGCCGCCACCTCCGCCGCCGGAGAATTCAGATTCCGTCGTTACCTCCGCTCCGTCGCTGGTCAGAACTTATCGCGTCTGGCAAGGAAGTAACGTGTTTCTTTTCGGAGGGAGGCTCATATTTGGGCCTGATGTGAAATCTATATTTATATCCATTTTTCTTATTATTGTTCCCATCGCTGTGTTCTGTGCTTTGGTAGCGAGGAAATTGTTAGATGATTTTCCGCATCACTCTGGATGGTCAATAATGGGTGTGGTTATTGCTCTCACGCTGTTTGTTCTAATCACCCTTGTAGTGACCTCAGGGAGAGATCCTGGCATAGTACCTCGTAATGCTCAGCCTCCGGAGCCAGATGACTATCATTGGACTGAGAATAGCACCAATGGACACATTTCATCGTCACGAATTCCACGGACAAGGGATGTAATTGTCAATGGTATAACAGTGAAAGTCAAATATTGTGATACTTGCATGCTCTACAGACCCCTCCGTGCTTCTCACTGTTCAGTCTGTGATAATTGCGTGGAGCGATTTGATCATCACTGCCCATGGGTGGGTCAGTGTATTGGACTGATATATGAATTCGTGATGTTGCTGAATAACCTTTTCCATTACTCCTTGCTTGTATGTACATTGCCGCAGCGAAATTACCGGTTCTACTACATGTTTGTTTTCTCAGCCACTCTGCTTTGCTTATATGTACATGCCTTTTGCTGGGTTTACATTGTAAGGATCAAGGACTTCGAGAAAATATCAATTTGGAGAGCAATGTCCAAAACTATAGCATCCACTGCACTAATAATCTACACCTTCGTTTGTGTCTGGTTTGTTGGCGGCCTCGCTGTTTTCCACACGTACCTCATCAGCACAAACCAGTCTACTTACGAAAATTTTAAATACCGGTATGATCCTCAAACCAACCCATACAACAGAGGGATATTTAACAACTTCAAAGAAGTATTCTGCTCTAGAATTCCTCCGTCCAAGAATAATTTCAGGTCTAAGGTTCCAAGGGAGCCATTAGATTCATATCAAAGAACGGACATTAGGCCCTTAAGCCCAATGATGAAAAGAACCACCAGGCATATGGAATTATTAGTTGGGAATTCAGTTTATAATGAGCAGGAAGAGGAGGAAAATCATCATAGAGATGGGTCTGGGAATGAAGCTCCTAGCAAGGATAGTGAAAGCAAAGATAGTGGATTGACCGATAAGTCCGTGGATTTAAGCAGGATCCTTCACACAGAAGGAGTGGAGGTCCAAGAAAGTTCGCTTGGTAGAAACCCTTCATGGAAAACAACTTCACAAGTTTGTGACAGCATAATCGAAGTTGGGGAATCAAATTGGATTACTGGGCCCAGTTACTCAACTCAAGAGGTTGTATAG 1392 0.4361 MPPPPPPPPENSDSVVTSAPSLVRTYRVWQGSNVFLFGGRLIFGPDVKSIFISIFLIIVPIAVFCALVARKLLDDFPHHSGWSIMGVVIALTLFVLITLVVTSGRDPGIVPRNAQPPEPDDYHWTENSTNGHISSSRIPRTRDVIVNGITVKVKYCDTCMLYRPLRASHCSVCDNCVERFDHHCPWVGQCIGLIYEFVMLLNNLFHYSLLVCTLPQRNYRFYYMFVFSATLLCLYVHAFCWVYIVRIKDFEKISIWRAMSKTIASTALIIYTFVCVWFVGGLAVFHTYLISTNQSTYENFKYRYDPQTNPYNRGIFNNFKEVFCSRIPPSKNNFRSKVPREPLDSYQRTDIRPLSPMMKRTTRHMELLVGNSVYNEQEEEENHHRDGSGNEAPSKDSESKDSGLTDKSVDLSRILHTEGVEVQESSLGRNPSWKTTSQVCDSIIEVGESNWITGPSYSTQEVV* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03529 463 ProSiteProfiles DHHC domain profile. 154 193 - -
Lapu3g03529 463 PANTHER ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN 55 344 - -
Lapu3g03529 463 MobiDBLite consensus disorder prediction 376 436 - -
Lapu3g03529 463 Pfam DHHC palmitoyltransferase 216 302 IPR001594 GO:0016409
Lapu3g03529 463 Pfam DHHC palmitoyltransferase 153 193 IPR001594 GO:0016409
Lapu3g03529 463 MobiDBLite consensus disorder prediction 376 414 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g03529 Lapu-Chr3 58680294 58684831 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g03529 87 350 Lipid Metabolism Gene Families AT4G22750 25.993 1.53e-11 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g03529 - - gmx:100788304 709.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g03529 3 58680294 58684831 Lapu3g03529 3 58680294 58684831 ECH