Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03525 ATGGCCGAGATTCAGCCGCCGGAGGGGCAAATAAACGGTGCCGGAGGAACCCTAATTCTTCACTCCTTGGAGCCCGCCATCGGATCCAAACGTCAGCGGCGGCCAAGCGTTCGATTGGGCGACATCGGTGGCGACCAACCCTACGATTCCACGCGTCGCAACGCAAAGCCATGGAAACTCGCCTTCGACAGCCACCATCACCACCACCACCGCAACAAGGACAAGGACCCAGGTAAACCCTCCAAGACTCGTCCTTTAACAAACCTAAGCGAGTTTAACGAAACCCTAGAAGGCTCGAACGACCGAGAAGCGGGGAACGTGGACTCCGTTGCAATTGGCAGCTGGAAGGTGAAGGAGTCCAAGAAGAGGGGCTCGGTCGCCACCAAAAGGGTCAGATCGAATTGGGTTTCGCGAATCGAGGACGGTGGCGGTGACAATGGTGGAGGCGAAGGAGAGGGAGAGAAATATAATAACGGGGACGAAGATGGGGAGGACGATGACGGGTATCGGGAATTTGAGGTGGAGAATTCGGAGAGTCCTATGAAGGAGCAAAGCCCTATTCATAGCATGGAGAATTTGGGGGTTGATGGGCATAGGAGGGTTTTTAAGGGTAGGGAAAGGGAACAACTGCATGATGGGGTTGAGCTATCTGCACCATCTGATACTGATGTTAGGGATTGGAAGTGTGGGGATAGGAATAATGAGAATGGTGGTGGAAGGGTTAGGGGTGGTGAAGATGGGGTTAGGGTTTGGCTTAATGGACTGGGGTTAGGGAGATATGCGCCCGTGTTTGAAGTGCATGAGGTGGATGATGAGGTTTTGCCCATGTTGACTCTGGAGGATCTCAAGGATATGGGGATTAGTGCTGTTGGGTCCAGGAGAAAAATGTACACGGCCATTCAGAAGCTTGGGAAGGGCTTCTCTTGA 927 0.5318 MAEIQPPEGQINGAGGTLILHSLEPAIGSKRQRRPSVRLGDIGGDQPYDSTRRNAKPWKLAFDSHHHHHHRNKDKDPGKPSKTRPLTNLSEFNETLEGSNDREAGNVDSVAIGSWKVKESKKRGSVATKRVRSNWVSRIEDGGGDNGGGEGEGEKYNNGDEDGEDDDGYREFEVENSESPMKEQSPIHSMENLGVDGHRRVFKGREREQLHDGVELSAPSDTDVRDWKCGDRNNENGGGRVRGGEDGVRVWLNGLGLGRYAPVFEVHEVDDEVLPMLTLEDLKDMGISAVGSRRKMYTAIQKLGKGFS* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03525 308 CDD SAM_superfamily 248 302 - -
Lapu3g03525 308 Pfam SAM domain (Sterile alpha motif) 247 303 IPR001660 GO:0005515
Lapu3g03525 308 SUPERFAMILY SAM/Pointed domain 246 303 IPR013761 -
Lapu3g03525 308 MobiDBLite consensus disorder prediction 24 195 - -
Lapu3g03525 308 MobiDBLite consensus disorder prediction 83 102 - -
Lapu3g03525 308 SMART SAM_4 240 306 IPR001660 GO:0005515
Lapu3g03525 308 ProSiteProfiles SAM domain profile. 243 306 IPR001660 GO:0005515
Lapu3g03525 308 MobiDBLite consensus disorder prediction 157 172 - -
Lapu3g03525 308 Gene3D - 243 303 IPR013761 -
Lapu3g03525 308 PANTHER SCP160 244 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g03525 Lapu-Chr3 58652928 58653974 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g03525 - - gmx:100789887 511.916
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g03525 3 58652928 58653974 Lapu3g03525 3 58652928 58653974 ECH