Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03512 ATGGGCAAGGAGAGCCAAGTGTCCGCTATGGAAATCGACGCTCCGAAACCGACTAATTCCGATCAGATCGTTCCCAAATTCTCCATTAACGTGCTGCAGCTGTTGAAATCGGCGCAAATGCAGCATGGCTTGCGCCACGGAGATTACACTCGCTATAGGAGGTATTGCACCGCTCGTTTGAGAAGGTTATATAAATCGTTGAAGTTTACCCATGGTCGTGGCAAATATTCTAAAAGGGCCATAACTGAATCTACTGTCTCTGAAGTGAGGTTTCTTCATCTAATTCTGTATACAGCAGAGAGAGCTTGGAGTCATGCAATGGAGAAAAGGCAGCTTCCAAATGGTCCAAATGCACGTCAAAGAATTTATTTGATTGGTAGGTTGCGGAAAGCAGTAAAATGGGCTACTTTGTTTTCACAATTGTGTGCGGTCAAGGCAGATTCTAGAACCTCTCTGGAAGCTGAGGCTTATGAATCCTATATGAAAGGGAGTTTGTTGTTTGAGCAAGATCAGAATTGGGACGTGGCTTTAAAGAACTTCAAAAGTGCTAGGGCTGTATACGAGGAATTAGGGAAATATGGAGATCTGGATAACCAAGTTTTGTGTCGTGAGCGAGTTGAGGAGCTAGAACCCAGTATCCGATACTGCCTTCACAAAATTGGCCAGTCAAATCTACAGGCCTCTGAACTTTTACAAATTGGTGATGTGGAAGGTCCTGCATTAGACCTTTTTAAAGCTAAACTAGAGGCTGTCATGGCTGAGGCAAGATCTCAGCAAGCTGCTTCCATGACAGAATTCCTTTGGCTTGGCCACAGATTTCCTATATCAAATGCCAAAACAAGGGTTTCCATCCTGAAAGCTCAGGAGCTGGAGAAAGATATACATGGTCCATCGGCAGACTCAATTCCAGCAGACAAAAGACTAGTTATTTTTGACAAAATCTTTTCTGCATATCATGAAGCCCGAGGCTATATCCGGGCTGATTTGGCCACTACAGGAAGTGCAGAAAGCGTGAAAGATGAGTTGAATGGTCTGGATAAGGCTGTCAGTGCTGTCCTTGGAGAAAGAACCATTGAACGCAACCTCTTGCTGGTTAAGGTTGCAAAAAGCAAACTTGCAAAGCGGCATGATGATAAAAATGAAAAAGTCACCAAACCTGAAGAGCTTGTCCGCTTATATGATCTCTTGCTACAGAACACAGCTGATCTATCTGATTTAGTCAGTTCTGGAAGGGATAAAAAACCAGAAGAAGTTAGCTTTGCTGAAGTGTGTTCATGCAAAAGTTTGGCTTTCCGAGCTCAGAGGTGCTTTTATGTTGCAAAGTCGTACAGTGTGGCTGGGATGAGGGCTGAAGCATATGCATTGTACTGTCGTGCTCGCGATTTGGCAGATGATACCTTAAAAAAGTTTCAAATGTTAGATGGTGATAATAAGACTATGGTTAAAGAGTTGGAGGACCTGTGCAAGGAGTGCCGATCTAATAGTTGTATTGAGCATGCGTTGGGGATCATAGAGGAAAAGAAGACTCAAGATAATCTATCTGAAAAGGTCTCCAATATATCATTGACCGGAACTGAGCGGTTGGAAAAGTTCCTTCTTGAGAAACTGGAAGTTTATGAGTCTGCTGTGGGTGATTCAAATGTGAAGTGTACACCGCGCATTACAGGCTTTCCCCCATCTTTCCAGGCAATTTCCCGTAATCCTATTGTGCTGGATCTGGCTTATAACATGATCGAATTCCCAGCTATTGAAAATAGGATGAAGAAGGATAGAAAAGCCAAGGGCGGCTTTATGAGTAGAATATTTGGATGA 1812 0.4327 MGKESQVSAMEIDAPKPTNSDQIVPKFSINVLQLLKSAQMQHGLRHGDYTRYRRYCTARLRRLYKSLKFTHGRGKYSKRAITESTVSEVRFLHLILYTAERAWSHAMEKRQLPNGPNARQRIYLIGRLRKAVKWATLFSQLCAVKADSRTSLEAEAYESYMKGSLLFEQDQNWDVALKNFKSARAVYEELGKYGDLDNQVLCRERVEELEPSIRYCLHKIGQSNLQASELLQIGDVEGPALDLFKAKLEAVMAEARSQQAASMTEFLWLGHRFPISNAKTRVSILKAQELEKDIHGPSADSIPADKRLVIFDKIFSAYHEARGYIRADLATTGSAESVKDELNGLDKAVSAVLGERTIERNLLLVKVAKSKLAKRHDDKNEKVTKPEELVRLYDLLLQNTADLSDLVSSGRDKKPEEVSFAEVCSCKSLAFRAQRCFYVAKSYSVAGMRAEAYALYCRARDLADDTLKKFQMLDGDNKTMVKELEDLCKECRSNSCIEHALGIIEEKKTQDNLSEKVSNISLTGTERLEKFLLEKLEVYESAVGDSNVKCTPRITGFPPSFQAISRNPIVLDLAYNMIEFPAIENRMKKDRKAKGGFMSRIFG* 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03512 603 CDD SRP68-RBD 30 218 IPR034652 GO:0003723
Lapu3g03512 603 Gene3D - 26 222 IPR038253 GO:0003723
Lapu3g03512 603 FunFam Signal recognition particle subunit SRP68 26 223 - -
Lapu3g03512 603 PIRSF SRP68 27 597 IPR026258 GO:0005047|GO:0005786|GO:0006614|GO:0008312|GO:0030942
Lapu3g03512 603 PANTHER SIGNAL RECOGNITION PARTICLE 68 KDA PROTEIN 22 602 IPR026258 GO:0005047|GO:0005786|GO:0006614|GO:0008312|GO:0030942
Lapu3g03512 603 Pfam RNA-binding signal recognition particle 68 44 578 IPR026258 GO:0005047|GO:0005786|GO:0006614|GO:0008312|GO:0030942
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g03512 K03107 - gmx:100816486 1107.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g03512 3 58485416 58494314 Lapu3g03512 3 58485416 58494314 ECH