Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03503 ATGGCTTCAACCACTGCTTTTCCATTTCCAAGTTCAAGCTTTTTCACTCCCCAAACTTGGGTTCAGAGTGGACCCTTTAGTTTGCAGTGTCTCGGAGGAAGAATGGAACATAACAGTAACGGGGCAAAGATCAAAAGCACTATTCTTCACCATCTCTTCCAGAAGCAGAGACAGACTCCGTACTATGACAATCTATGTCGCCCTGTTTCAGATTTGCTTCCATTCATTGCCAATGGGATCAGAGGTGTCACCACCAATCCAGCGATTTTTGAGAGAGCTATTTCATCCTCAAATGCCTACAATCAACAGTTGAGGAAATTGGTAGGGGAAGGGAAAGACATAGAGAGTGCATATTGGGAATTGGTTGTGAAAGACATACATGATACTTGCAAACTGTTAGAGCCAATTTACAATGATTCAGATGGGGTAGATGGATATGTATCTGTTGCAGTTTCCCCCAAGCTAGCAAATGATACCAAGAGGACAATTGAAGAGGCAAAATGGCTTCATAATAAGATGATTGGGTGTACAAATATTTACATTAAAATTCCTGCAACTGATGAATCCATCCTTTCTATGAAGGAGGTTATTTCTCTCGAGATAAGTGTAAATGCCACTCTCATATTTTGCCTCCCTAAATATGAAGCAGTGATTGATGCTTACTTGGATGGCCTTGAGGCTTGTGGCAGGACTGATCTCTCTAAGGTTTCAAGTGCAGCAGCATTCTACATCAGTAGAGTGGATACTACACTTGACAGAAAACTTGAACAAATTGGTACCTCTGAGGCTCTTGATCTCAAAGGAAAGGGTGCAATTGCCCAAGCAGTCTTAGCTTACCAACTTTATCAGAAAAAGTTTTCTGGCCCAAGATGGGAAAACTTGGAGAAGAGAGGTGCCAAGAAGCAGAGGTTGATGTGGGCTTCCACAAATGTGAAAAATCCAGCTTACCGTGACACATTTTATGTTGATTCTCTTATTGGACCGGATACAATTTCAACCATGCCAGAGAAAGCTCTTAAAGCCTTCATGGACAATGGTATTGTTTCAAGAACTCTTGATGCAAAAGTATCAGAGGCTCAAGAGATTTACAATGCAATTGAGAAGTTGGGGATTGATTGGAGTTCTGTTGGATCACAACTGGAACACGAGGTGCTGGATTCCTTCACAAAAAGCTTTGACAATGTGCTTCAATGCATTCACAAGAAAACACTAGTACAAGTCTAA 1224 0.4134 MASTTAFPFPSSSFFTPQTWVQSGPFSLQCLGGRMEHNSNGAKIKSTILHHLFQKQRQTPYYDNLCRPVSDLLPFIANGIRGVTTNPAIFERAISSSNAYNQQLRKLVGEGKDIESAYWELVVKDIHDTCKLLEPIYNDSDGVDGYVSVAVSPKLANDTKRTIEEAKWLHNKMIGCTNIYIKIPATDESILSMKEVISLEISVNATLIFCLPKYEAVIDAYLDGLEACGRTDLSKVSSAAAFYISRVDTTLDRKLEQIGTSEALDLKGKGAIAQAVLAYQLYQKKFSGPRWENLEKRGAKKQRLMWASTNVKNPAYRDTFYVDSLIGPDTISTMPEKALKAFMDNGIVSRTLDAKVSEAQEIYNAIEKLGIDWSSVGSQLEHEVLDSFTKSFDNVLQCIHKKTLVQV* 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03503 407 NCBIfam transaldolase 74 397 IPR004732 GO:0004801|GO:0005737|GO:0006098
Lapu3g03503 407 Hamap Transaldolase [tal]. 58 407 IPR004732 GO:0004801|GO:0005737|GO:0006098
Lapu3g03503 407 PIRSF Trnald_Bac_Plnt 38 406 IPR004732 GO:0004801|GO:0005737|GO:0006098
Lapu3g03503 407 Gene3D Aldolase class I 48 403 IPR013785 -
Lapu3g03503 407 CDD Transaldolase_like 60 393 IPR004732 GO:0004801|GO:0005737|GO:0006098
Lapu3g03503 407 SUPERFAMILY Aldolase 56 402 - -
Lapu3g03503 407 Pfam Transaldolase/Fructose-6-phosphate aldolase 77 397 IPR001585 GO:0005975
Lapu3g03503 407 ProSitePatterns Transaldolase signature 1. 82 90 IPR018225 GO:0005975
Lapu3g03503 407 PANTHER TRANSALDOLASE 59 402 IPR001585 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g03503 Lapu-Chr3 58367003 58370789 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g03503 K00616 - gmx:100811673 635.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g03503 3 58367003 58370789 Lapu3g03503 3 58367003 58370789 ECH