Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03502 ATGGCATTGCAGGCACCAAGTCTTCACTGTGCCCCCACCGTGAATGGTGGCCTGCGAAGACCCTCCATCAACCCTTTTGCTGTCAAGTCCTCCTTCTTCTCTGGTTCACTCAACCTTTATCTCCATCCCAATCACCACCACCTCACTTCAGCATCACCCAGGATTTCCATGCGCGTTGCTTCCAAACAGGCCTATATCTGTCGCGATTGCGGGTACATTTACAGTGACAGAACTCCCTTTGAAAAGTTGCCTGATAACTACTTCTGCCCTGTTTGTGGTGCTCCAAAACGAAGATTTAGGACCTATGCACCGGATGTCACTAAAGATGCCAATAGCACAGCTGTTAGAAAGGCACGAAAAGCTGAACTACAGAGAGATGAAGCAATTGGGAAAGCACTTCCTATTGCAGTTGTCGTGGGAATTGCCGCGCTTGCTGGATTATATTTCTATTTGAATAGCCAATACTAG 468 0.4765 MALQAPSLHCAPTVNGGLRRPSINPFAVKSSFFSGSLNLYLHPNHHHLTSASPRISMRVASKQAYICRDCGYIYSDRTPFEKLPDNYFCPVCGAPKRRFRTYAPDVTKDANSTAVRKARKAELQRDEAIGKALPIAVVVGIAALAGLYFYLNSQY* 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03502 155 ProSiteProfiles Rubredoxin-like domain profile. 62 102 IPR024934 GO:0005506
Lapu3g03502 155 SUPERFAMILY Rubredoxin-like 62 106 - -
Lapu3g03502 155 Gene3D - 62 101 - -
Lapu3g03502 155 CDD rubredoxin 65 99 IPR024935 GO:0005506
Lapu3g03502 155 PANTHER RUBREDOXIN-LIKE SUPERFAMILY PROTEIN 1 155 - -
Lapu3g03502 155 Pfam Rubredoxin 65 99 IPR024935 GO:0005506
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g03502 Lapu-Chr3 58363975 58366429 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g03502 - - gmx:100812204 258.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g03502 3 58363975 58366429 Lapu9g00908 9 13595831 13597076 PCT