Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03493 ATGGGAGGAGCTACTGCAGATCTTCACCACCACGAATCCGACATAGAACTAACTGATGCTGAAAGGACTGAAACCAACAGCACCAAGTTAGGGGCTTCAGAGTCAAAAGCTGGCACTGATGTTGAACTTGACAGTGGCATCAAATCTCAGACTGAGGCTGAAGGACACTATGTTGAGGTGACCATGGACATTCATGGTGATTCTGTTGCCTTACACAGTGTTAAAGCTTTTGGTGGTGTTGATGTGGTGGAAGAGGAGGGTGAGAAGCTGGGTTTGACAGGGAAGAGGCTTGAGAAGAAAAGATCCTTCGGTGCCTCTGTGGTTCAGAATGCTGCTATCCGCATGAAGCAGCTAAAGCGTTTGGCTTCTTTCTCCAAACCAGCTCCTAAACACTTTGAAAGAACAAAGTCTGCAGTGGCTCATGCTCTCACAGGGCTCAAGTTTATCAGCATGACCGATGGTGGTGCAGGATGGGTTGAGGTGGAGAAGCGGTTTGAGAAGCTCACTGCTACCACTGGTGGCTATCTTCCTCGTGCTCTCTTTGCACAATGCTTAGGATTGAACAAGGAGTCCGAGGCTTACGCAGAGAAGCTTTTTGATACTCTTGCTAGGCAGAGAGGTATTCAAGGGGGTTCCATTAACAAGATCCAGTTGAGGGAGTTCTGGGACAATATTTCTGACCAGAGCTTTGATACTAGACTCAAAACATTCTTTGACATGGTTGATAAAGATGCAGATGGAAGAATCACCGAGGAAGAAATTAAAGAGATTATCTGCCTTAGCGCCACTGCCAACAAACTGTCGAACATCCAGAAGCAAGCAGAGGAATATGCAGCTTTGATCATGGAAGAACTGGACCCTGATGACTCAGGATACATCATGATAGACAGCCTGGAGACACTTTTGTTGCATGGACCAGAGGAAACTACAAGAGGAGAAAGCAAGAACCTGAGTCAAATGCTAAGCCAAAAGCTTAAGCCTACATACGTGGACAGTGCAATAATGAGGTGGTATAGGGATGCCAAATACGTTTTGCTGGACAATTGGCAAAGATCTTGGGTACTTGCCCTGTGGATTGGTGTGATGTTAGGCCTATTTGCCTATAAATTTGTGCAATATCGGAGAAGAGCTGCCTATGAAGTTATGGGCCATTGCGTATGCATGGCAAAAGGTGCAGCAGAGACGCTTAAATTGAACATGGCTCTCATCTTGTTACCTGTTTGCCGAAACACCATCACCTGGCTCAGGAATAAGACCAAACTAGGTGCTGTAGTTCCTTTTGACGACAACATCAACTTCCACAAGGTAATAGCTGTGGCAATAGCAATTGGTGTTGGTATACATGCCATCTATCATCTTACCTGTGATTTTCCTCGCCTTCTTCATGCAAGTGATGAAAAGTACAAGCTGATGAAACCCTTCTTCGGAGACAGACCATCAGATTATTGGTATTTTGTGAAATCATGGGAAGGAGTAACAGGGATTGTAATGATAGTGCTAATGGCAATAGCTTTTACATTGGCCAATCCTGCATTCAGGAGAGGCAGGACTAAACTACCCAAACCATTCAACAAACTCACAGGTTTCAATGCCTTTTGGTATTCTCATCATCTCTTCGTTTTTGTCTATGCCCTTTTGGTTGTGCATGGAATCAAACTTTACTTGACTAAGGAATGGTACAAGAAAACGACATGGATGTATCTGGCTGTTCCCATTACCATTTATGCATTGGAAAGACTGATAAGAGCACTCAGATCAAGCATCAAGTCTGTCAAAATATTGAAGGTGACTCTTTATCCTGGAAATGTGTTAGCACTTCAAATGTCAAAGCCGCAGGGGTTTAGCTACAAAAGTGGACAATACATGTTTGTCAATTGTGCTGCTGTGTCTCCATTCGAATGGCATCCATTTTCCATAACTTCAGCCCCTGGTGATGATTACCTTAGCGTTCACATCAAAATAATTGGTGATTGGACCCGAAGTCTGAAAACCAAATTCTCAGAGGCATGCCAACAACCCCTCAATGGGCAGAGTGGACTTCTAAGAGCTGACTTGCAAGGAGATAACAGTTCAATATGTTTCCCGAAGGTTCTGGTGGACGGGCCATACGGGGCTCCAGCACAGGACTACAAGGAGTACGAGGTGGTTCTGCTGGTGGGGCTAGGAATAGGGGCGACACCAATGATAAGCATTGTGAAGGACATGGTGAAGAGGTTGAAGGAGATCGAGGAGGAAGATGAGAGGAGAATGGAGGAGGGAGGAGTGGTGAAGAGTGATGATGAGTTCAAGACAAGGAGGGCATACTTCTATTGGGTGACGAGAGAGCAGGGTTCCTTCGACTGGTTCAAAGGGGTGATGAACGAGGTGGCGGAAGAGGATCGAAGGAAGGTGATAGAGCTCCACAGCTACTGCACCAGCGTCTACGAAGAGGGTGATGCTCGCTCTGCTCTCATCGCCATGTTGCAGTCCATCAACCATGCCAAGAATGGCCTCGACATCGTTTCTGGCACCCGCGTCATGTCTCACTTTGCCAAACCCAATTGGCGCACTGTCTTCAAACGCATTGCCCTTAATCATCCACATGCTCGTGTTGGGGTGTTTTACTGTGGGCCATCAGCCCTCACCCATGAGCTTCGTCAGCTAGCATTGGATTTCTCTCACAACACATCCACCAAGTATGATTTCCACAAAGAAAATTTCTGA 2703 0.4602 MGGATADLHHHESDIELTDAERTETNSTKLGASESKAGTDVELDSGIKSQTEAEGHYVEVTMDIHGDSVALHSVKAFGGVDVVEEEGEKLGLTGKRLEKKRSFGASVVQNAAIRMKQLKRLASFSKPAPKHFERTKSAVAHALTGLKFISMTDGGAGWVEVEKRFEKLTATTGGYLPRALFAQCLGLNKESEAYAEKLFDTLARQRGIQGGSINKIQLREFWDNISDQSFDTRLKTFFDMVDKDADGRITEEEIKEIICLSATANKLSNIQKQAEEYAALIMEELDPDDSGYIMIDSLETLLLHGPEETTRGESKNLSQMLSQKLKPTYVDSAIMRWYRDAKYVLLDNWQRSWVLALWIGVMLGLFAYKFVQYRRRAAYEVMGHCVCMAKGAAETLKLNMALILLPVCRNTITWLRNKTKLGAVVPFDDNINFHKVIAVAIAIGVGIHAIYHLTCDFPRLLHASDEKYKLMKPFFGDRPSDYWYFVKSWEGVTGIVMIVLMAIAFTLANPAFRRGRTKLPKPFNKLTGFNAFWYSHHLFVFVYALLVVHGIKLYLTKEWYKKTTWMYLAVPITIYALERLIRALRSSIKSVKILKVTLYPGNVLALQMSKPQGFSYKSGQYMFVNCAAVSPFEWHPFSITSAPGDDYLSVHIKIIGDWTRSLKTKFSEACQQPLNGQSGLLRADLQGDNSSICFPKVLVDGPYGAPAQDYKEYEVVLLVGLGIGATPMISIVKDMVKRLKEIEEEDERRMEEGGVVKSDDEFKTRRAYFYWVTREQGSFDWFKGVMNEVAEEDRRKVIELHSYCTSVYEEGDARSALIAMLQSINHAKNGLDIVSGTRVMSHFAKPNWRTVFKRIALNHPHARVGVFYCGPSALTHELRQLALDFSHNTSTKYDFHKENF* 901
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03493 900 SFLD Ferric reductase subgroup (FRE) 341 900 - -
Lapu3g03493 900 SUPERFAMILY Riboflavin synthase domain-like 590 706 IPR017938 -
Lapu3g03493 900 PRINTS Cytochrome B-245 heavy chain signature 437 455 IPR000778 GO:0016020|GO:0016491
Lapu3g03493 900 PRINTS Cytochrome B-245 heavy chain signature 529 549 IPR000778 GO:0016020|GO:0016491
Lapu3g03493 900 PRINTS Cytochrome B-245 heavy chain signature 695 708 IPR000778 GO:0016020|GO:0016491
Lapu3g03493 900 PRINTS Cytochrome B-245 heavy chain signature 718 735 IPR000778 GO:0016020|GO:0016491
Lapu3g03493 900 ProSiteProfiles EF-hand calcium-binding domain profile. 229 264 IPR002048 GO:0005509
Lapu3g03493 900 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 581 709 IPR017927 GO:0016491
Lapu3g03493 900 FunFam Respiratory burst oxidase homolog A 132 250 - -
Lapu3g03493 900 Gene3D Translation factors 577 677 - -
Lapu3g03493 900 FunFam Respiratory burst oxidase protein A 704 900 - -
Lapu3g03493 900 SFLD NADPH oxidase subgroup (NOX) 133 900 - -
Lapu3g03493 900 FunFam Respiratory burst oxidase homolog A 577 669 - -
Lapu3g03493 900 Pfam Respiratory burst NADPH oxidase 132 232 IPR013623 GO:0004601|GO:0050664
Lapu3g03493 900 Gene3D - 132 250 - -
Lapu3g03493 900 MobiDBLite consensus disorder prediction 1 46 - -
Lapu3g03493 900 Pfam Ferric reductase NAD binding domain 713 882 IPR013121 GO:0016491
Lapu3g03493 900 SUPERFAMILY EF-hand 159 306 IPR011992 -
Lapu3g03493 900 CDD NOX_Duox_like_FAD_NADP 593 900 - -
Lapu3g03493 900 Pfam Ferric reductase like transmembrane component 391 547 IPR013130 -
Lapu3g03493 900 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 710 900 IPR039261 -
Lapu3g03493 900 PANTHER NADPH OXIDASE 194 900 - -
Lapu3g03493 900 MobiDBLite consensus disorder prediction 7 23 - -
Lapu3g03493 900 Gene3D - 704 900 IPR039261 -
Lapu3g03493 900 Pfam FAD-binding domain 589 706 IPR013112 GO:0016491
Lapu3g03493 900 ProSitePatterns EF-hand calcium-binding domain. 242 254 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g03493 Lapu-Chr3 58281324 58287636 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g03493 49 900 Miscellaneous Gene Families AT5G51060 65.744 0.0 1181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g03493 K13447 - gmx:100808271 1572.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g03493 3 58281324 58287636 Lapu3g03493 3 58281324 58287636 ECH