Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03481 ATGAATTCTCCAATTCATGCCCCTTCACCACCTTCCTCTTCTTCTTGCTCGTATAATCGTCCTCCTCCATGTCTCACTCATGCTTCTCGTAATTTCAAGTCCCCTCTGTTGTTGCCACAGGCAATCCGTACCTCTCAAAAGATGCATCGGAGCTCTGGAGGCCATGTGGAGACTTCTTCTAACGCTAATGGCTTGAAAAACTATGCAGTGGGCAAAAGTACTTCAGGATGGTTTGAAACACAGCCCTTGGTTCCTGAGCAGTTTCTCAACAGGCGCTTGCTGCCGGTTGAAGCTTTAGTAACTCCAACAGTTCAAGATTTTTCTGGTACACCTCTTATTGGTGATGATAAGATTGGAGTGTTATTGTTGAACCTCGGAGGTCCTGAGACTCTAGAAGATGTGCAGCCTTTTTTGTTTAACCTTTTTGCTGACCCAGATATTATACGACTACCGAGGTTATTTAGCTTTCTTCAGAAGCCATTGGCCAAATTTGTATCTGTTTTAAGAGCACCAAAGAGCAAAGAAGGCTATGCTTCTATTGGGGGTGGATCTCCTCTTAGACGTATAACTGATGCACAGGCTGAAGAGTTGAGAAAATCTCTTTGGGAAAAGAATGTACCAGCCAAAGTGTATGTTGGCATGCGTTATTGGCATCCATTCACTGAAGAGGCTATTGAACAGATTAAAAGGGATGGAATTACAAAGCTTGTTGTGCTTCCACTTTATCCGCAATTTTCAATTTCAACAAGTGGTTCAAGTCTTCGTCTCTTAGAGAGTATATTCAGAGAGGATGAATATCTAGTTAACATGCAGCACACCGTAATTCCTTCATGGTACCAGCGAGAAGGATACATTAATGCCATGGCAAATTTAATTGAAAAAGAGCTGAAAGGTTTTGACTGTCCTGAGAAGGTCATGATATTCTTTAGTGCACATGGGGTGCCTCTTGCTTATGTAGAAGAGGCTGGTGATCCATACAAGGCAGAGATGGAGGAATGTGTTGATTTAATCATGGAAGAGCTTGAAAAGAGGAAGATAACTAATGCATACACCCTTGCTTATCAGAGTAGAGTTGGACCTGTGGAATGGTTAAAACCCTATACAGACGAGACAATAGTTGAACTTGGGAAAAGGGGAGTAAAAAGTCTGCTGGCTGTACCAATTAGCTTTGTCAGCGAGCATATTGAAACTCTAGAAGAAATTGATGTTGAGTACAAAGAATTGGCTCTAAACTCTGGTATAGAAAAATGGGGTCGTGTTCCTGCTCTAGGAACTGAACCCACCTTCATTTCAGATTTGGCCGATGCCGTAATTGAGAGCCTCCCTTATGTTGGTGCGATGGCAGTTTCAAACCTTGAAGCTCGACAGTCTTTGGTTCCACTAGGCAGCGTAGAAGAGTTATTGGCAGCATATGACTCACAACGGAGAGAGTTGCCACCGCCAGTAATTGTGTGGGAATGGGGATGGACCAAAAGTGCTGAAACTTGGAATGGAAGGGCTGCTATGCTTGCTGTGCTTCTTCTGTTGTTTTTGGAAGTCACCACTGGTGAGGGATTTCTGCACCAGTGGGGAATATTGCCGTTGTTTAGGTGA 1593 0.4344 MNSPIHAPSPPSSSSCSYNRPPPCLTHASRNFKSPLLLPQAIRTSQKMHRSSGGHVETSSNANGLKNYAVGKSTSGWFETQPLVPEQFLNRRLLPVEALVTPTVQDFSGTPLIGDDKIGVLLLNLGGPETLEDVQPFLFNLFADPDIIRLPRLFSFLQKPLAKFVSVLRAPKSKEGYASIGGGSPLRRITDAQAEELRKSLWEKNVPAKVYVGMRYWHPFTEEAIEQIKRDGITKLVVLPLYPQFSISTSGSSLRLLESIFREDEYLVNMQHTVIPSWYQREGYINAMANLIEKELKGFDCPEKVMIFFSAHGVPLAYVEEAGDPYKAEMEECVDLIMEELEKRKITNAYTLAYQSRVGPVEWLKPYTDETIVELGKRGVKSLLAVPISFVSEHIETLEEIDVEYKELALNSGIEKWGRVPALGTEPTFISDLADAVIESLPYVGAMAVSNLEARQSLVPLGSVEELLAAYDSQRRELPPPVIVWEWGWTKSAETWNGRAAMLAVLLLLFLEVTTGEGFLHQWGILPLFR* 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03481 530 CDD Ferrochelatase_N 118 280 IPR033659 -
Lapu3g03481 530 SUPERFAMILY Chelatase 116 447 - -
Lapu3g03481 530 ProSitePatterns Ferrochelatase signature. 307 328 IPR019772 GO:0004325|GO:0006783
Lapu3g03481 530 SUPERFAMILY Chlorophyll a-b binding protein 485 525 - -
Lapu3g03481 530 Pfam Ferrochelatase 117 440 IPR001015 GO:0004325|GO:0006783
Lapu3g03481 530 Gene3D - 117 440 - -
Lapu3g03481 530 CDD Ferrochelatase_C 286 424 IPR033644 -
Lapu3g03481 530 FunFam Ferrochelatase 117 295 - -
Lapu3g03481 530 MobiDBLite consensus disorder prediction 45 65 - -
Lapu3g03481 530 Hamap Coproporphyrin III ferrochelatase [cpfC]. 116 441 IPR001015 GO:0004325|GO:0006783
Lapu3g03481 530 Gene3D - 279 422 - -
Lapu3g03481 530 PANTHER FERROCHELATASE 115 467 IPR001015 GO:0004325|GO:0006783
Lapu3g03481 530 NCBIfam ferrochelatase 116 441 IPR001015 GO:0004325|GO:0006783
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g03481 Lapu-Chr3 58107243 58113579 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g03481 K01772 - gmx:100803481 981.089
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g03481 3 58107243 58113579 Lapu3g03481 3 58107243 58113579 ECH
Lapu3g03481 3 58107243 58113579 Lapu9g00874 9 13116629 13138557 PCT