Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03476 ATGCAAGAGACGCTCCTCACTCTCCCTCTCTCACACCACCAAGACATCCACATTCGCGCCAAGAAGAAAAAACCGCAACAACCAGGAACCGAACATAGCAGCAGCAACAACAACAGCAGCAGCGGCGGCCACTCCACTACTCGCGTGTCGCGGCGCGTGAGTCCTGTTGGGGAGAAGTCTCTGCCGAACGGCGACATCTACAGCGGCACCCTGTCGGGGAACGCGCCGCACGGCACCGGGAAGTACCTCTGGTCCGATGGGTGCATGTACGAGGGGGACTGGCGAAAAGGGAAAGCTTGCGGCAAGGGGAGGTTCTCGTGGCCATCCGGGGCCACGTACGAGGGGGAATTCAAGTCGGGTCGGATAGACGGGTTCGGATCCTTCATCGGCGTCGACGGCGACATGTATAGAGGCTCCTGGGTGGCCGACAGAAAGCACGGTTTCGGCGAGAAACGATACGGTAATGGGGATGTCTATGAAGGTTGGTGGAGGTGCAACTTGCAGGAGGGGGAGGGGAGGTACACGTGGCGGAACGGGAACGAGTACGTGGGGGAGTGGAGGAGTGGTGTGATTTCAGGGAAGGGGGTTTTGGTGTGGGCGAATGGGAACCGTTACGAGGGGTTTTGGGAGAATGGTGTGCCTGTGGGGAAGGGTGTTTTCACGTGGTGTGATGGGAGCACGTGCGCAGGGAACTGGGGGAAGGAGTTTATGGAAGAGGCACGTGAGGAGAAGATGAAGAGGAGTTCGGTGGATGGGTGTAGGAGTGTGAGTTTTCCCAGAATTTGTATTTGGGAGTTGGATGGAGAAGCTGGGGACATCACCTGTGACATTGTTCACAATGCTGAGGCTTCTCTGTTCTACAGGGATGGTACCACTACCAGTGAGTCTGAGAACGGTGGAGATGATATTATTATTAATAATAATAATGGGTGTGGGGTTTTGCAGAAGAGTCCTTGTTGGTCTCTTGATGGTTCTGGTGGTGAGGTTAAGAAGCCTGGTCAAACTGTGTCCAGAGGGCACAAGAGTTATGATCTTATCCTTAATCTTCAACTGGGTATTAGATACACGGTTGTGAAGCATGCTTCTATAGTGAGAGAGCTTAGACCAGGCGATTTTGATCCCAAGGAGAAGTTCTGGACGAGGTTCCCACCTGAAGGGTCTAGGTTCACACCCCAGCATCATTCAGTGGACTTCAGGTGGAAAGACTACTGTCCCATGGTGTTCAGACATCTAAGGGAATTATTTGCCATAGATCCTGCGGATTACATGCTTGCTATTTGCGGAAGTGACTCACTTAGGGAGATGTCTTCTCCGGGAAAAAGTGGAAGCATCTTTTATCTCACTCAAGATGACCGCTTCATAATTAAGACTGTCAAGAAGTCTGAAGTCAAGGTGCTCATTAGGATGCTTCCAAGCTACTACCAACATGTTTGTCAGTACAAGAACTCCTTGGTGACTGCATTCCTGGGCGTGCATTGTGTTAAACCTGTTGGAGGTCAAAAGACCCGGTTTATTGTAATGGGAAATGTGTTTTGCTCGGAGTACCGGATCCACAAGAGGTTTGACCTCAAAGGTTCTTCTCATGGTCGAACAACGGATAAGCCAAGGGAGGAGATTGATGAGACTACCACTCTCAAAGACCTTGATCTTAATTTTGTCTTTCGCCTGGAGCAGTCTTGGTTTCAAGAGCTTATACGGCAACTCGATAGAGACTGTGAGTTCTTGGAAGCAGAGGGAATCATGGATTACAGTCTTCTAATTGGCCTGCATTTTCGTGATGATTGCTCGGTTGATGAAATGAAAAGTTCACCACGCAATTCATATTCAGGAAAAAGAGACATGCTTGACGATGAGATGCTCACATGCCGGGGACCTCTGATCCGGCTGGGAATGAACATGCCTGCCAGAGCAGAGAGGGTGTGTAAGGCTGGATTGGATCAGCAAACGGGTGGTGGAAGTGGCAATTCTAGTTCTATCCCTTCAGAGAGTAATAGCCAGATCTCTGATGTAATCCTCTACTTTGGTATCATTGACATTCTCCAAGACTACGATATAAGCAAAAAGATAGAACATGCATACAAGTCACTACAAGTGGACTCCACCTCTATCTCAGCTGTTGATCCCAAGCTATACTCCAAAAGGTTTAGGGATTTCATACACAGAATCTTTGTAGAGGATAAATGA 2184 0.4959 MQETLLTLPLSHHQDIHIRAKKKKPQQPGTEHSSSNNNSSSGGHSTTRVSRRVSPVGEKSLPNGDIYSGTLSGNAPHGTGKYLWSDGCMYEGDWRKGKACGKGRFSWPSGATYEGEFKSGRIDGFGSFIGVDGDMYRGSWVADRKHGFGEKRYGNGDVYEGWWRCNLQEGEGRYTWRNGNEYVGEWRSGVISGKGVLVWANGNRYEGFWENGVPVGKGVFTWCDGSTCAGNWGKEFMEEAREEKMKRSSVDGCRSVSFPRICIWELDGEAGDITCDIVHNAEASLFYRDGTTTSESENGGDDIIINNNNGCGVLQKSPCWSLDGSGGEVKKPGQTVSRGHKSYDLILNLQLGIRYTVVKHASIVRELRPGDFDPKEKFWTRFPPEGSRFTPQHHSVDFRWKDYCPMVFRHLRELFAIDPADYMLAICGSDSLREMSSPGKSGSIFYLTQDDRFIIKTVKKSEVKVLIRMLPSYYQHVCQYKNSLVTAFLGVHCVKPVGGQKTRFIVMGNVFCSEYRIHKRFDLKGSSHGRTTDKPREEIDETTTLKDLDLNFVFRLEQSWFQELIRQLDRDCEFLEAEGIMDYSLLIGLHFRDDCSVDEMKSSPRNSYSGKRDMLDDEMLTCRGPLIRLGMNMPARAERVCKAGLDQQTGGGSGNSSSIPSESNSQISDVILYFGIIDILQDYDISKKIEHAYKSLQVDSTSISAVDPKLYSKRFRDFIHRIFVEDK* 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03476 727 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 427 722 IPR002498 GO:0016307|GO:0046488
Lapu3g03476 727 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 62 189 - -
Lapu3g03476 727 Pfam MORN repeat 67 89 IPR003409 -
Lapu3g03476 727 Pfam MORN repeat 205 227 IPR003409 -
Lapu3g03476 727 Pfam MORN repeat 113 135 IPR003409 -
Lapu3g03476 727 Pfam MORN repeat 90 111 IPR003409 -
Lapu3g03476 727 Pfam MORN repeat 182 204 IPR003409 -
Lapu3g03476 727 Pfam MORN repeat 136 158 IPR003409 -
Lapu3g03476 727 Pfam MORN repeat 159 180 IPR003409 -
Lapu3g03476 727 Gene3D - 510 723 - -
Lapu3g03476 727 PIRSF PIP5K_plant 236 727 IPR017163 GO:0005524|GO:0016308
Lapu3g03476 727 PIRSF PIP5K_plant 4 244 IPR017163 GO:0005524|GO:0016308
Lapu3g03476 727 Gene3D - 142 188 - -
Lapu3g03476 727 Gene3D - 97 141 - -
Lapu3g03476 727 Gene3D - 56 96 - -
Lapu3g03476 727 Gene3D - 189 257 - -
Lapu3g03476 727 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 76 724 IPR023610 -
Lapu3g03476 727 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 328 509 IPR027484 -
Lapu3g03476 727 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 337 723 IPR002498 GO:0016307|GO:0046488
Lapu3g03476 727 CDD PIPKc_AtPIP5K_like 342 722 - -
Lapu3g03476 727 MobiDBLite consensus disorder prediction 29 53 - -
Lapu3g03476 727 SMART morn 134 155 IPR003409 -
Lapu3g03476 727 SMART morn 111 132 IPR003409 -
Lapu3g03476 727 SMART morn 157 178 IPR003409 -
Lapu3g03476 727 SMART morn 65 86 IPR003409 -
Lapu3g03476 727 SMART morn 88 109 IPR003409 -
Lapu3g03476 727 SMART morn 203 224 IPR003409 -
Lapu3g03476 727 SMART morn 180 201 IPR003409 -
Lapu3g03476 727 SUPERFAMILY SAICAR synthase-like 339 723 - -
Lapu3g03476 727 FunFam Phosphatidylinositol 4-phosphate 5-kinase 328 509 - -
Lapu3g03476 727 SMART PIPK_2 368 724 IPR002498 GO:0016307|GO:0046488
Lapu3g03476 727 MobiDBLite consensus disorder prediction 1 72 - -
Lapu3g03476 727 FunFam Phosphatidylinositol 4-phosphate 5-kinase 97 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g03476 Lapu-Chr3 58057718 58063263 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g03476 49 726 Acyl Lipid Metabolism Gene Families AT1G21980 65.922 0.0 955
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g03476 K00889 - gmx:100789188 1347.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g03476 3 58057718 58063263 Lapu9g00870 9 13056294 13060202 PCT