Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03472 ATGGGGGGGCTTTGTTCAAAGTCTGCTAAAGGTGACAAGGTGTTTGCCAAAGCAGATGCACATTCTGATAACCATAAATCTGATGGCAAGAGCCACAAGTCCACCAATATGGTGCCCAGTGATTTGACAAGTGCAGGCGATCATGGAGTAGACAAGAAAAATCAAGAAGGTGCTGCTGCACCTACAGGGACCGGTTCTGATGATTTCTATGATGGAATCCCACGGTTTCCTGATTCTTTTCCCCATAAGTCTAGGTCAGTAAGATCAAGGCAAGCTGTGGCAAAGGTCTCAGAGGTGAGTTTACGCCTGGGCAGAGCTGGTATTGATGTTTTGGACACTCTTGGGAGCAGCATGACAAATTTAAGTGGTGGTGGGTTTGTATCTGGTGCTGTGATGAAGGGGAATGAAATTGGTATTTTAGCATTTGAAGTTGCTAACACAGTCGTCAAGGGTTTTAGTCTTATGGAATCTCTTTCAACAAAAAGTATTAAGCACTTAAAAGAAGAGGTTCTACCGTTAGAGGCTGTGCAAGATTTAGTGTCAAAGGATATGGATGAACTTCTTAGGATTGTTGCTGCAGACAAGAGGGATGAGTTGAAAGTCTTTTCAGATGAGGTAATTCGTTTTGGAAATCGTTCAAAGGATCCTCAGTGGCACAACTTGGACCGATACTTTGAGAAAATTAGCAAAGAGCTCAATTCTCCAAGACAATCAAAGAAGGAGGCTGAATTACTAATGCAACAATTGATGACTTTGGTTCAGTTTACAGCTGAATTATACCATGAATTACATGCTTTGGATAGATTTGCACAAGATTATCAGCATAAACTTCAAGAGGATGATAATTTGGGTGCAGCTCAAAATGGTGATGGCCTTTCAATCTTGAGGGCAGAACTTAGAAGTCAAAAGAAGCAAGTTAAACATTTGAAAAAAAAGTCACTTTGGTCCAGAAGTTTGGAGGAGGTTATGGAGAAGCTTGTAGAGATAGTTCTTTTTTTGCATTTGGAGATAAGCAATGCCTTTGGCACTGAAGATGACCATAAACCATTAATTCAAACCATCAGCAATCGCCAAAGATTGGGTCCTGCAGGCCTTGCTTTGCATTATGCTAATATAGTGCTCCAAATTGATACTCTTGTTGCCAGATCCAGTTCTATGCCTGCAAATACAAGGGATGCATTGTATCAGAGCTTGCCTCCAAATATAAAATTAGCTTTGCGTTCCAAATTACCAAGCTTTCATGTTGTAAAAGAGCTCACCATATCAGATATTAAACAAGAGATGGAGAAAACATTGCATTGGCTGGTTCCAATTGCTACAAACACAGCAAAAGCACACCATGGTTTTGGTTGGGTAGGGGAGTGGGCAAGCACTGGCTCTGACCTGAATAAGAAGACCATAAAGGCTGATGTGATGAGGATTGAAACGCTCCACCATGCTGATAAAGACAAAGTAGATAATTATATTCTTGAACTTCTCCTATGGCTTCACCGCTTGGCCATCAAAAGTAAATCCGGCATTGATACTGGAGAAATGAGGTCTACGTTAAAGTCCCATGTCGGCTCTACCCTGCAAGCAACAAATCAACAATCTACAAAAGCCTTACAACCATTGTTAACAAGTGACGAGCAGCAAATGCTGCAAGATGTTTTTAGTAATAAAAATCGTAAAAGAGGGATCAGTAAAAGCTTGGACTTTGACAGTGTGAAGATTGGATTGACAGATAATGAAAGACTTACCAAGAGTAGCAGTTATTCATCTACAAGTAGAAGCAAAGAATTTTCTTTTAATAGAATTTTGTCTAAGCTTCCCGTTATTGATTTTGTTATGGACAAAAAGAGAGCATTGGATGTGATTGACAGACTAGATGTGGACAGATAA 1881 0.4024 MGGLCSKSAKGDKVFAKADAHSDNHKSDGKSHKSTNMVPSDLTSAGDHGVDKKNQEGAAAPTGTGSDDFYDGIPRFPDSFPHKSRSVRSRQAVAKVSEVSLRLGRAGIDVLDTLGSSMTNLSGGGFVSGAVMKGNEIGILAFEVANTVVKGFSLMESLSTKSIKHLKEEVLPLEAVQDLVSKDMDELLRIVAADKRDELKVFSDEVIRFGNRSKDPQWHNLDRYFEKISKELNSPRQSKKEAELLMQQLMTLVQFTAELYHELHALDRFAQDYQHKLQEDDNLGAAQNGDGLSILRAELRSQKKQVKHLKKKSLWSRSLEEVMEKLVEIVLFLHLEISNAFGTEDDHKPLIQTISNRQRLGPAGLALHYANIVLQIDTLVARSSSMPANTRDALYQSLPPNIKLALRSKLPSFHVVKELTISDIKQEMEKTLHWLVPIATNTAKAHHGFGWVGEWASTGSDLNKKTIKADVMRIETLHHADKDKVDNYILELLLWLHRLAIKSKSGIDTGEMRSTLKSHVGSTLQATNQQSTKALQPLLTSDEQQMLQDVFSNKNRKRGISKSLDFDSVKIGLTDNERLTKSSSYSSTSRSKEFSFNRILSKLPVIDFVMDKKRALDVIDRLDVDR* 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03472 626 Coils Coil 292 312 - -
Lapu3g03472 626 MobiDBLite consensus disorder prediction 15 32 - -
Lapu3g03472 626 MobiDBLite consensus disorder prediction 15 71 - -
Lapu3g03472 626 Pfam Protein of unknown function (DUF668) 359 444 IPR007700 GO:0045927
Lapu3g03472 626 Pfam Domain of unknown function (DUF3475) 139 195 IPR021864 GO:0045927
Lapu3g03472 626 PANTHER OS01G0873900 PROTEIN 1 623 IPR045021 GO:0045927
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g03472 Lapu-Chr3 58006421 58016413 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g03472 - - gmx:100804075 1049.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g03472 3 58006421 58016413 Lapu3g03472 3 58006421 58016413 ECH
Lapu3g03472 3 58006421 58016413 Lapu9g00868 9 13038963 13042464 PCT