Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03471 ATGAGCTCGAGCAATTTCACGGGGTTTCTGTTGGCCGTGGTTTCCAGCGCTTTCATTGGCTCCAGCTTCATCATCAAGAAAAAGGGTCTCCAACTCGCCAGTGCCAATGGCCCACGTGCAAGCGTTGGTGGCTATGGTTACTTGCTTCAACCCCTCTGGTGGGTCGGAATGATTACCATGATTGTTGGAGAGATAGCTAATTTTGTAGCTTACATTTATGCCCCTGCTGTGCTTGTTACTCCCCTCGGTGCTTTGAGTATAATTGTAAGTGCCGTCTTGGCTCATTTTCTCTTGAAGGAGAAGCTGCAGAAAATGGACATGTTGGGGTGTCTTCTATGCATTGTGGGATCCACTGTTGTAGTGCTCCATGCGCCTGAAGAGAAGTCTCTTACTTCTGTGCAAGAAATATGGGAATTGGCCACTCAACCTGCGTTCCTCTCGTATACGGCCTCTGCAATTGCAGTGACATTGTTCTTGGTTTTGTATTGTGCTCCCCGCTATGGCCAGACTAATATTTTTGTTTACATTGGAATATGCTCGATAATCGGGTCCTTGACTGTCATGAGTGTAAAAGCAATTGGCATTGCGATAAAACTTACAATAGAAGGTTCAAACCAGGCTTTCTACTTTCAGACATGGATTTTTGCAATGGTTGTTGTCACCTGCGTCATCGTCCAACTAAATTATCTTAATATGGCATTGGATAATTTTAACACAGCAGTTGTTTCCCCGATCTATTATGCATTGTTCACAGCTTTTACAATATTGGCCAGTGCAATTATGTTTAAGGACTATTCTGGTCAAAGTATAAGCAATATTGTATCAGAGCTATGTGGTTTAATCACTATTTTATCTGGAACGACAATTTTGCACAGTACAAAAGAGCCAGATTCTCCAATCCTTACAGATTTATATACACCATTGTCTCCAAAAGTGTCATGGTACTTCCAAGGCAATGGAGAACCCTGGAAACAGAAGGAGGAGGATGCACCACCCTTTAATTTGATTACAGTTGTACGGCAAGATCATTTCAAGTGA 1038 0.4268 MSSSNFTGFLLAVVSSAFIGSSFIIKKKGLQLASANGPRASVGGYGYLLQPLWWVGMITMIVGEIANFVAYIYAPAVLVTPLGALSIIVSAVLAHFLLKEKLQKMDMLGCLLCIVGSTVVVLHAPEEKSLTSVQEIWELATQPAFLSYTASAIAVTLFLVLYCAPRYGQTNIFVYIGICSIIGSLTVMSVKAIGIAIKLTIEGSNQAFYFQTWIFAMVVVTCVIVQLNYLNMALDNFNTAVVSPIYYALFTAFTILASAIMFKDYSGQSISNIVSELCGLITILSGTTILHSTKEPDSPILTDLYTPLSPKVSWYFQGNGEPWKQKEEDAPPFNLITVVRQDHFK* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03471 345 Pfam Magnesium transporter NIPA 5 295 IPR008521 GO:0015095|GO:0015693|GO:0016020
Lapu3g03471 345 SUPERFAMILY Multidrug resistance efflux transporter EmrE 51 124 - -
Lapu3g03471 345 PANTHER UNCHARACTERIZED 4 296 IPR008521 GO:0015095|GO:0015693|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g03471 Lapu-Chr3 57992159 57998967 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g03471 K22733 - gmx:100799756 619.002
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g03471 3 57992159 57998967 Lapu9g00865 9 12996126 13004590 ECH
Lapu3g03471 3 57992159 57998967 Lapu3g03471 3 57992159 57998967 ECH
Lapu3g03471 3 57992159 57998967 Lapu9g00865 9 12996126 13004590 PCT