Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03429 ATGGTGAGGTTTTTAGGGTTGACTCTTGGTTACGCAGAAGAACCCCGGGAAATAGCATCAAGATCGAACCTGACCAGTGACTCTGGTGAAAATGGATGGCTCATCAGGTTCTTTGACTCGGCGTTCTTCTGCGAGTGGATTGCTGTTAGCTACTTGTATAAGCATGATCACACTGGGGTGCGTGATTATCTCTGCAATAGAATGTATACTCTTCCGTTGCAAGGTGTTGAGAGTTATTTGTTCCAGATATGTTACATGATGATACATAAGCCTAGCCCGTCCTTGGATAAATATGTGATAGATGTCTGCTCGAAGTCTCTTAAAATTGCTTTGAAGGTATACTGGTTCTTGTTGGCTGAGCTTGAGGACTCTGATGATAATGAAGGCATTAGTAGAATTATGGAGAAGTGTCAGATAGCTGCCACCTTGATGGGTGAGTGGCCACCTCTAATTAGGCCTCAAACTGAACCTCCAAGCCCGGGAGGAAAGAGCCAAGTTTTGAATAGGTTACTGTCATCAAAAAATCGTTTGTTGTCACTAACATCCTCACCTCCTGGTCAGAAGTCTTTATCATTCTCATCTTCCTCAGGAAACAATTTGCATGAGGATGGGAAACCGCTATCTCCTGATGAGAACAAGATATTTAAGAAGTTTATGCCAGGCCCTAAGGTTAGAGATGCTTTACTTTTTAGAAAGTCAGTGGACAAAGATGATGATGGTTCTGAAAAGGATGGTTTTTTCAAGAGGCTTTTGAGAGATAGCAAAGGTGACGATGAACCAGGCCAAAGAATTCGTGATGCTTTTCTTTTTAGGAAGTCATCCGTGAAAGATGACGAAGATTCTGAAAAGGATAATTTCTTTAAAAGGTTTTTAAGGGACAGTAGAGGTGATGATGAAGACTCAGAAAAGGATGGTTTCTTTCGAAGGCTCTTAAGGGATAGTAGAAGTGAAGATGAAGATGTAGCTTCAAGTTCAGAGGGATTATTTAAGAGGTTGTTTCGTGATAGTAAAAATGATCCTGAGGACAAAACACACACTAAAACAATAGAATATGAAGATAAAGAGGGATTTTTCCGAAAGCTTTTCCGGGAGAAATCAGAAGATAGGAAGGATGGGAGTGATAGGAATGATATCAGAGATGCTGGTTTTGAAGAGAAATATGCCAAACCTGCTGAAGAGGATGAAAAAGAAGGTTTTTTTCGGAAATTATTAAAGGATAAATTTGAGGACAAGAAGGATACAAATGATAAAATTGAAGAGGGTACTACCAATGGGGACGAAGAAGAGTCTTCTGAGTTTTCCTTGTTCAAAAGACTATTTCGTGTGCACCCAGAAGATGGTAAAAGTAGTCTGGCCAATGCAAACAGCAATAATGGTGGTTTACCTGAAAGTAGTCCAGGTACTGATAAATTTTTTCGCAAGTTGTTCAGAGATCGTGACCGTTCAATTGAAGATTCAGAGCTATTGGGTCCAAAAAGACAGAAAGAGAAGCATCCTGGATCCCCAAAGCAGCAAAGTGAAAAATCGACAAAGCCGCCATTACCAATTAGTCCATCTCAGTTTCGGAAAGGGGCATACCATGACTCGTTGGAGTTTGTGCAGTCATTATGTGATACATCGTATGGGTTAGTGGATGTATTTCCAATTGAAGATCGCAAAAGTGCTCTTCGTGAGGCGCTTGTAGAAATCAATCTTCATGTAGCAAAGGTTCAGAACACTGGAGGAGTTTGTTTTCCATTGGGAAAGGGCATGTATCGTGTGCTTAATATACCTGAAGATGAAGCTGTTCTCTTGAACTCTAGGGAGAAGGCACCTTTCCTGATCTGTGTAGAGGTTTTGAAATGTGAAATGCCAAGTAATTCCAAGGAGGCATCTAGTTCTCAGAAACTTTCTCAAGGGGGAATCCCTTTGGCTAATGGAGATGCTCTCTTGCAAAGACCACCACCTTGGGCTTATCCATTACGGACAGCACAAGAGGTTTACCGCAATAGCAATGATAGGATGTCCAGTTCGACTGCTCATGCAATTGACCAGGCAATGACTCATGTATCTGAGGCAAAAATCAAATTTGTTAGTGTGAATCTTTCTGTGGAAACACAGTTAAATAGTCAGCCAGAGAAGATTGAAGTGGCCAATCTACATGGTGGCAGTCCACATTCTGCTTCAATCCATAGAGGTGGTGTGTATGACAAGGATGCAGCAGGACATGGCAGTGATTTGGAATGGGTACGTGTAGTGTTGGCAGCTGATCCTGGGGTTAGATTGGAAGATATTGAGGAGCAAGCACCACCTCGAAGGAAGGAACATCGCCGTGTTCCAAGTACGGTGGCAATAGAGGAAGTAAAGGCTGCGGCAGCAAAAGGGGAAGCACCTCTTGGACTTCCTTTGAAAGGTGCTGGTCAAGATTCGTCTGATGCACAATCAACGGTGGCTAATGGAATTACTCCCAAAGCCAGCGATGCCTTGTCTGGTGAACTTTGGGAGGCAAAGAAGGATAGGATATGCAAGGCTTCCGTATATGGGAAGTTACCTGGTTGGGACTTGCGATCTGTTATTGTTAAGAGTGGTGATGATTGCAGGCAGGAGCATCTGGCTGTTCAACTTATTTCTCACTTCTATGATATTTTCCAAGAAGCTGGTCTACCCCTCTGGCTGCGACCATATGAAGTTCTGTGTACTTCTTCCTACACAGCTGTTATTGAAACAATTCCTGATACGGCTTCTCTGCACTCTATCAAAAGTAGATATCCCAACATCTCTAGTTTACGTGAATTCTTCAGTGCTAAGTATGAAGAAAATTCTCCCAGTTTTAAACTTGCCCAGAGAAACTTTGTTGAAAGTATGGCAGGATATTCCCTGGTGTGCTACTTTCTGCAGGTGAAGGATAGGCATAATGGGAACCTCCTATTGGATGAAGAAGGTCATATCATACATATTGATTTCGGCTTCATGCTCTCAAATTCACCTGGTGGTGTTAACTTTGAAAGTGCACCTTTCAAATTAACTCGTGAACTTCTTGAGGTTATGGATTCTGATGCTGAGGGTGTTCCAAGTGAGTTCTTTGATTATTTTAAGGTTTTATGCATTCAGGGCTTCCTTACTTGCCGCAAGCATGCTGAGCGCATCATTCTTCTTGTTGAGATGTTGCAGGATTCAGGTTTCCCATGCTTTAAAGGTGGTGCTCGGACAATACAGAACCTACGAAAGCGATTCCATCTCAGTTTAACTGAAGAGCAATGTGTCTCCTTGGTGCTTTCACTCATCAGCAGTAGCCTGGATGCTTGGAGGACACGGCAGTATGATTATTATCAGAGGGTTTTGAATGGAATACTATGA 3336 0.4233 MVRFLGLTLGYAEEPREIASRSNLTSDSGENGWLIRFFDSAFFCEWIAVSYLYKHDHTGVRDYLCNRMYTLPLQGVESYLFQICYMMIHKPSPSLDKYVIDVCSKSLKIALKVYWFLLAELEDSDDNEGISRIMEKCQIAATLMGEWPPLIRPQTEPPSPGGKSQVLNRLLSSKNRLLSLTSSPPGQKSLSFSSSSGNNLHEDGKPLSPDENKIFKKFMPGPKVRDALLFRKSVDKDDDGSEKDGFFKRLLRDSKGDDEPGQRIRDAFLFRKSSVKDDEDSEKDNFFKRFLRDSRGDDEDSEKDGFFRRLLRDSRSEDEDVASSSEGLFKRLFRDSKNDPEDKTHTKTIEYEDKEGFFRKLFREKSEDRKDGSDRNDIRDAGFEEKYAKPAEEDEKEGFFRKLLKDKFEDKKDTNDKIEEGTTNGDEEESSEFSLFKRLFRVHPEDGKSSLANANSNNGGLPESSPGTDKFFRKLFRDRDRSIEDSELLGPKRQKEKHPGSPKQQSEKSTKPPLPISPSQFRKGAYHDSLEFVQSLCDTSYGLVDVFPIEDRKSALREALVEINLHVAKVQNTGGVCFPLGKGMYRVLNIPEDEAVLLNSREKAPFLICVEVLKCEMPSNSKEASSSQKLSQGGIPLANGDALLQRPPPWAYPLRTAQEVYRNSNDRMSSSTAHAIDQAMTHVSEAKIKFVSVNLSVETQLNSQPEKIEVANLHGGSPHSASIHRGGVYDKDAAGHGSDLEWVRVVLAADPGVRLEDIEEQAPPRRKEHRRVPSTVAIEEVKAAAAKGEAPLGLPLKGAGQDSSDAQSTVANGITPKASDALSGELWEAKKDRICKASVYGKLPGWDLRSVIVKSGDDCRQEHLAVQLISHFYDIFQEAGLPLWLRPYEVLCTSSYTAVIETIPDTASLHSIKSRYPNISSLREFFSAKYEENSPSFKLAQRNFVESMAGYSLVCYFLQVKDRHNGNLLLDEEGHIIHIDFGFMLSNSPGGVNFESAPFKLTRELLEVMDSDAEGVPSEFFDYFKVLCIQGFLTCRKHAERIILLVEMLQDSGFPCFKGGARTIQNLRKRFHLSLTEEQCVSLVLSLISSSLDAWRTRQYDYYQRVLNGIL* 1112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03429 1111 SMART pi3k_hr1_6 850 1109 IPR000403 -
Lapu3g03429 1111 MobiDBLite consensus disorder prediction 449 464 - -
Lapu3g03429 1111 MobiDBLite consensus disorder prediction 411 432 - -
Lapu3g03429 1111 ProSitePatterns Phosphatidylinositol 3- and 4-kinases signature 1. 853 867 IPR018936 GO:0016301
Lapu3g03429 1111 MobiDBLite consensus disorder prediction 447 470 - -
Lapu3g03429 1111 Pfam Phosphatidylinositol 3- and 4-kinase 850 1057 IPR000403 -
Lapu3g03429 1111 SUPERFAMILY ARM repeat 54 126 IPR016024 -
Lapu3g03429 1111 PANTHER PHOSPHATIDYLINOSITOL KINASE 818 1111 IPR015433 GO:0046854|GO:0048015
Lapu3g03429 1111 MobiDBLite consensus disorder prediction 178 202 - -
Lapu3g03429 1111 MobiDBLite consensus disorder prediction 483 504 - -
Lapu3g03429 1111 FunFam phosphatidylinositol 4-kinase beta 1 743 903 - -
Lapu3g03429 1111 Gene3D - 908 1109 IPR036940 -
Lapu3g03429 1111 MobiDBLite consensus disorder prediction 178 213 - -
Lapu3g03429 1111 MobiDBLite consensus disorder prediction 366 395 - -
Lapu3g03429 1111 ProSiteProfiles PIK helical domain profile. 1 140 IPR001263 -
Lapu3g03429 1111 CDD PI4Kc_III_beta 819 1111 - -
Lapu3g03429 1111 FunFam Phosphatidylinositol 4-kinase beta 1 908 1109 - -
Lapu3g03429 1111 SUPERFAMILY Protein kinase-like (PK-like) 555 1104 IPR011009 -
Lapu3g03429 1111 Gene3D - 750 903 - -
Lapu3g03429 1111 Gene3D - 48 139 IPR042236 -
Lapu3g03429 1111 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 828 1096 IPR000403 -
Lapu3g03429 1111 MobiDBLite consensus disorder prediction 792 811 - -
Lapu3g03429 1111 MobiDBLite consensus disorder prediction 483 520 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g03429 Lapu-Chr3 57536622 57566514 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g03429 1 1110 Lipid Metabolism Gene Families AT5G09350 68.947 0.0 1529
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g03429 K19801 - gmx:100784942 2007.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g03429 3 57536622 57566514 Lapu3g03429 3 57536622 57566514 ECH
Lapu3g03429 3 57536622 57566514 Lapu9g01136 9 24838998 24860078 PCT