Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03428 ATGGTACACGAAGCTAGTGAGTACATTAAAAAATGCTTAGGTGGTGGGAAAGACGATGCACTGATCTTGTGTGGCTCTGGCACAACTGCAGCCATCAAGAGGCTGCAAGAAGTGATGGGGATCACAGTACCCTCTATTTTGAGGGAAAGGGTTTTGAAGAGCCTTAGCACAGAAGAAAGATGGGTGGTTTTCGTTGGACCTCACGAACACCATTCTAACCTCCTTTCTTGGAGGCAAAGTTTGGCTGAGGTGGTAGAAATTGGTCTTGATCACAAAGGGTTGGTAAACGTGGATGCTCTAAAGCTACAACTTGAGGCCTACAAAAACACCGGTCGACCCATGTTGGGATCTTTCTCAGCTTGTAGCAATGTCACAGGAATCCTCTCAGATACACGAGCAATTGCTCAGCTTCTTCATCAATACAAAGCGTTTGCGTCCTTTGATTTTGCAGCGAGTGGTCCATACGTGGAGATAAAGATGAGGTCTGGGGAGAGTGATGGTTACGATGCGGTGTTCTTGAGTCCACACAAGTTTCTTGGTGGCCCCGACTCTCCTGGGGTTCTCCTCATGAACGATGCTCTCTACCGATTAAGATCTTCGCCGCCATCAACTTGTGGAGGTGGAACCGTGGATTACGTCAACGGTTTCAACGAAAAGGATACACTGTATTTGAAGAACATAGAGGAAAGGGAAAATGGGGGCACCCCTCCTATAATCCAGACGGTGAGAGCAGCATTGGCATTTTGGGTGAAAGAGTACATCAGCTACAAAGAGATTGAGAAACGTGAACACGTTTACATTAACAAAGCACTGAAGAGACTAAAGTCCAACCCAAACATTGAGATTCTTGGAAACTTAAGCACCAAAAGACAAGCCATATTGTCATTCATCATTTATTCTACCACCAATAAAAGTTCTTTATCACCTGAGAGCAAAAGGGGTAAGCCACTTCATGGCCCTTTTGTTGCAACACTGCTAAGTGACCTGTTTGGCATCCAAGCTCGTGGAGGGTGTGCTTGTGCTGGACCTTATGGCCACCAATTGCTCAGTATCAACAAATCTCAATCTCTTGCTATTAGATCAGCAATTCAAGAGGGTTATGTTGGAGTAAAACCTGGATGGAGTAGAGTTAGTTTTCCCTATTACATGGAGGAGGAAGAGTTTGAGTTCATTTTAACAGCAATAAAGTTTGTAGCAAACTATGGCCAACGCTTCCTTCCCTTGTATACCTTCAATTTGAGAAATGGCAGCTGGAAAATGAAGAAAGAGCAACTTCAGGCTCTGCTCAACCAAAATAATTGCAACTTTCAGAAAACTCTAGAGCAAGCAAATGATTTGAAAGCAGGTGTTGGATATAATAATGGTGGAGCTAAACAAGTTAGTGTGCTAAGGAAATCATACTTAGATATAGCAAAATATATTTTCTTCTACCTAATGCGGATGAAGCACCCCTTATTGGCAGAGAAACCTGTGTTGGTCCAACCATGCATGGATCAAAGCCATGGCCAGGACGAAATCAACACCGAGGTTGGAGTGTTATCCAAAACAAGCACATCAGAAACATCTCATGACTTTTGCAACCACTCTGAGTCCTTCAAGAAGCTCGTGGAGATGGGTCTGCCGTGTAATGAATCAGTGGTGGAAAAACTGTGTTGGTTGCAGTCCCAAATCATTGGTTACGATGCTGAGTTTGATTCTCCATTTGGAAAAAGAAAAGTTGTCTATGCTGACCACACTGCTTCAGGCCGCAGCCTTCACTATAATGAGAATTTCATCATCAATCACGTTCTTCCTTTCTATGGTAACACGCACACATGCGACAGTTATGTTGGAAGCAGGACAACGAAAATGGTACACGAAGCAAGTGAGTACATTAAGAAATGTTTAGGTGGCGGGGAAGATGATGCACTTATATTATGTGGCTCGGGCACAACTGCAGCTATCAAGAGGCTACAAGAAGTGATGGGGATCTCTGTGCCATCTATTTTGAGGGAAAGGGTTTTGAAGAGTCTGAAAACAGAGGAAAGATGGGTGGTTTTTGTCGGCCCGCATGAGCACCATTCAAACCTTCTTTCTTGGAGGCAAAGTTTGGCTGAGGTGGTAGAGATTGATCTCGATGACGAAGGATTGCTTGACATGGATGCTCTAAGGATACAAGTTGAGGCCTACAAAGATACCAACCGGCCCATGTTGGGATCTTTTTCAGCTTGTAGCAATGTCACCGGAATCTATTTAGATACACGTGCAGTTGCTCAGCTTCTTCATCAGTACAAAGCCTTTGCATGCTTTGATTTTGCTGCGAGTGGTCCATACGTGGAGATTGACATGAGGTCTGGGGAGAGTGATGGGTATGATGCAGTGTTCCTGAGTCCACATAAGTTTCTTGGTGGTCCTGACTCTCCTGGGGTTCTCCTCATGAACAGGGTCCTTTATCGGCTAGGATCTTCACCACCGTCCACTTGTGGAGGTGGAACCGTGACTTATGTCAATGGCTTCGATGAACAGGAAACATTATACCTGGAGAACATAGAGGAAAGGGAAACTGGGGGCACGCCTCCAATAATCCAGACAGTGAGAGCAGCATTGGCATTTTGGGTGAAAGAATACATAAGCTGTGAAGAGATTGAAAAAAGTGAACAACTGTACATCAACAAGGCACTTAAGAGGCTTGGCTCAAACCCCAACATTGAGGTTCTAGGAAACTTGAAGGCCAAGAGACAAGCTATATTGTCATTTCTGATTTACTCCACCACCAATTGTTCCTCAGCTGGTGAGTGGAGTGATGGTGGTAACCACAAAAATGAAGGGGAACTTGATTTGTGGGCAGAAACAGGGAACCAAAGAGGAAAACCACTTCATGGCCCATTTGTTGCAGCATTGCTCAATGACCTCTTTGGAATCCAAGCTCGAGGAGGGTGTGCTTGTGCTGGACCTTATGGCCACGAATTGCTCCACATCAACAAGTCTCAATCACTTGCCATTAGATCAGCTGTTCAAGAGGGCTATATTGGAGTAAAGCCAGGGTGGACTAGAGTTAGTTTTCCTTACTACATGAGTGAAGAAGATTTTGATTACATCCTGAAAGCCATAGAATTTTTAGCTGTGTATGGCCAAAGATTCTTTCCCCTTTATAGCTTTAATTTGATAAATGGGAGCTGGAGATTGAAGACAGAGAAAATTGAGGCACTAACCAGTTATGACTGTGATAATATTGGAGTGATGAAAAGGAACTCATACTTTGAGGTGGCTAAATGGTGTTGTGAGAAGCTACGGAGATCCTTTGCTGAGATATTCGATTCAATCTCACACACTGGAACAATTACAAGAATCAGGTTCACTTTTTCATCATAA 3351 0.4396 MVHEASEYIKKCLGGGKDDALILCGSGTTAAIKRLQEVMGITVPSILRERVLKSLSTEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDHKGLVNVDALKLQLEAYKNTGRPMLGSFSACSNVTGILSDTRAIAQLLHQYKAFASFDFAASGPYVEIKMRSGESDGYDAVFLSPHKFLGGPDSPGVLLMNDALYRLRSSPPSTCGGGTVDYVNGFNEKDTLYLKNIEERENGGTPPIIQTVRAALAFWVKEYISYKEIEKREHVYINKALKRLKSNPNIEILGNLSTKRQAILSFIIYSTTNKSSLSPESKRGKPLHGPFVATLLSDLFGIQARGGCACAGPYGHQLLSINKSQSLAIRSAIQEGYVGVKPGWSRVSFPYYMEEEEFEFILTAIKFVANYGQRFLPLYTFNLRNGSWKMKKEQLQALLNQNNCNFQKTLEQANDLKAGVGYNNGGAKQVSVLRKSYLDIAKYIFFYLMRMKHPLLAEKPVLVQPCMDQSHGQDEINTEVGVLSKTSTSETSHDFCNHSESFKKLVEMGLPCNESVVEKLCWLQSQIIGYDAEFDSPFGKRKVVYADHTASGRSLHYNENFIINHVLPFYGNTHTCDSYVGSRTTKMVHEASEYIKKCLGGGEDDALILCGSGTTAAIKRLQEVMGISVPSILRERVLKSLKTEERWVVFVGPHEHHSNLLSWRQSLAEVVEIDLDDEGLLDMDALRIQVEAYKDTNRPMLGSFSACSNVTGIYLDTRAVAQLLHQYKAFACFDFAASGPYVEIDMRSGESDGYDAVFLSPHKFLGGPDSPGVLLMNRVLYRLGSSPPSTCGGGTVTYVNGFDEQETLYLENIEERETGGTPPIIQTVRAALAFWVKEYISCEEIEKSEQLYINKALKRLGSNPNIEVLGNLKAKRQAILSFLIYSTTNCSSAGEWSDGGNHKNEGELDLWAETGNQRGKPLHGPFVAALLNDLFGIQARGGCACAGPYGHELLHINKSQSLAIRSAVQEGYIGVKPGWTRVSFPYYMSEEDFDYILKAIEFLAVYGQRFFPLYSFNLINGSWRLKTEKIEALTSYDCDNIGVMKRNSYFEVAKWCCEKLRRSFAEIFDSISHTGTITRIRFTFSS* 1117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03428 1116 Gene3D - 1 207 IPR015421 GO:0003824
Lapu3g03428 1116 Gene3D - 592 817 IPR015421 GO:0003824
Lapu3g03428 1116 SUPERFAMILY PLP-dependent transferases 567 1031 IPR015424 -
Lapu3g03428 1116 SUPERFAMILY PLP-dependent transferases 2 396 IPR015424 -
Lapu3g03428 1116 Gene3D Aspartate Aminotransferase, domain 1 848 1036 IPR015422 GO:0003824
Lapu3g03428 1116 Pfam Aminotransferase class-V 58 388 IPR000192 -
Lapu3g03428 1116 Pfam Aminotransferase class-V 598 914 IPR000192 -
Lapu3g03428 1116 PANTHER CYSTEINE DESULFURASE 544 1039 - -
Lapu3g03428 1116 Gene3D Aspartate Aminotransferase, domain 1 232 406 IPR015422 GO:0003824
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g03428 - - gmx:100778947 1070.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g03428 3 57534370 57566514 Lapu3g03428 3 57534370 57566514 ECH