Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03412 ATGGCTTCCTCTCATGGTAATGCACACTCTGATGCTGCAAAGATGGAACAGATAATCACCGAGTTCTTTGCCAAGAGTCTTCACATAATACTCGAATCGAGGGCACTCTATGTGTCCTCTCGCAATTTCTATGGTGATCAAGCTGTTTTGTCTCCATGTTCATCGTCTTCATCTTCGTCTAGTGTGCGGCCGAGGGATAAGTGGTTCAATTTGGCGCTCCGGGAGTGCCCGGCGGCGTTGGAAAACATTGACATCTGGCGCCAGAACAATCTTGAGTGCATAGTGATTGATGTGATTTTAGTGCAGAGGCCTCTGGAGTGGGACCCTGTGACTGTGAGTTTTTCTCCGAAAAGGGTTCTCCCTAGGAGTTCTTCGCTGAAGGAAAGATGCCCTTTTGGTTGGAACACTGATCAGGAAGATTTGGGGGTTGTGGGAAGGAGTGAAAAGATTGTGGAGAGGTGGGTTGTGCAGTATGAGAGTAGGAAGACAAGGGATTCTAGTTCTGGCAGTAGGAGGTCAAGCAGTGTTTCTTTGCATAACTTGTATAAGAAATCAACTTTGCTTTTGAGGTCTTTGTATTCCACTCTTAGACTTTTACCTGCCTATAAAATTTTCAGAGAGCTTAATTCTTCTGGACAAATTAGGGATTTTACCCTTGCTCACCGTGTATCTTCTTTTGTTGAGCCCTTCACCCGGAAAGAAGAGGCTGAAATGAAGAAATTCGGGTTCACCCCTGTGGATACATCTTCTGGTAGGCTGTGTCTTAGTGTGATGTATTGCCCGTTAGCCTCAGGTGTGAGCTCAGAACCTTCGACTCCAATGTCCCCACAAGTTATAGCAGACTATGTTGGGAGTCCATTGGCTGATCCGTGGAGGAGGTTTCCTTCTCTTCCTGTGGCAGGCTTGCCATCTCATGGCTCTCCATCATCGTTGCCATCTTCAAGGCAGCGCAGTTTGAGTTTTGAACATTATAGAGCCTCACCTCCATCTTATTTACCTTCCCCTACTTATTCAGAATCACTCTCATCAGTGTATAATGCAAGTTTGCGGCGTTTCCCCCCTGCAAGTTTACCTCCTCATCCAACTGAGATGTCTTTGATGCAAAAGAAGAATGCAAATTTTGATGATTATTATCCCTCTCGATCACCTCCCACCGATAATTCAGGACCATTACCATGCAAACCACTTTTACGATCTGAAAGTGCTCCTGTCAGCATACCTGCTGAAGTTGCTAATTCCCCTGGATACTCCAATAGACATAATGTGCTTCCGTCTCCTCCCTTACGTTCAAGGGGCACTGCTAAGATTGATAGAAATACGAATGCTACGCAAACTGGTGCAACAGCTGAGAAGTTGTTTTCTCTTGGAAAAGATGAGTCTCGAAAATATTCTGGAGTCAAGATATCAGCTAATAGCTCACCACAAATTTCAATTTCCAGAAGCTCCAGTAGGTCTTATCAGGATGATTTTGATGATACTGATTTTACTTGTCCATTTGATGTGGATGATGATGATATTACGGATCCAGGAAGCAGAGCTGAATCTCTAGATCATGGCCTTTTGGCTGAGACTGTCGAAGCTGGAGGATTCTTTCCCATTAGAAAGTCTCATGATGCTGCTGTTGGTGCGCTTGTACAAATGCTAAAGAAAGCGCCACCTCTCCGTCAAGATTTCTCCACTTCACAACACCTGTCACAAGAAGGTACAAACCCTGAAACCTGGAACAATAACATTGAAGGGCCCACCCAGATCCTAGAGGCATCAAGACCAGTGAGCATAATGTCTTCTGGGATGATAGCCACTAGAAAAACCACAGCTGATGCACTGGAAGAGTTCCACGGGTACAAAGAGATGAAAAACTTGTTGCTTATGCGAGGTAGTAAGCACCAGATATAG 1896 0.4499 MASSHGNAHSDAAKMEQIITEFFAKSLHIILESRALYVSSRNFYGDQAVLSPCSSSSSSSSVRPRDKWFNLALRECPAALENIDIWRQNNLECIVIDVILVQRPLEWDPVTVSFSPKRVLPRSSSLKERCPFGWNTDQEDLGVVGRSEKIVERWVVQYESRKTRDSSSGSRRSSSVSLHNLYKKSTLLLRSLYSTLRLLPAYKIFRELNSSGQIRDFTLAHRVSSFVEPFTRKEEAEMKKFGFTPVDTSSGRLCLSVMYCPLASGVSSEPSTPMSPQVIADYVGSPLADPWRRFPSLPVAGLPSHGSPSSLPSSRQRSLSFEHYRASPPSYLPSPTYSESLSSVYNASLRRFPPASLPPHPTEMSLMQKKNANFDDYYPSRSPPTDNSGPLPCKPLLRSESAPVSIPAEVANSPGYSNRHNVLPSPPLRSRGTAKIDRNTNATQTGATAEKLFSLGKDESRKYSGVKISANSSPQISISRSSSRSYQDDFDDTDFTCPFDVDDDDITDPGSRAESLDHGLLAETVEAGGFFPIRKSHDAAVGALVQMLKKAPPLRQDFSTSQHLSQEGTNPETWNNNIEGPTQILEASRPVSIMSSGMIATRKTTADALEEFHGYKEMKNLLLMRGSKHQI* 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03412 631 PANTHER UNCHARACTERIZED 3 628 IPR040182 GO:0000045
Lapu3g03412 631 MobiDBLite consensus disorder prediction 466 484 - -
Lapu3g03412 631 MobiDBLite consensus disorder prediction 466 489 - -
Lapu3g03412 631 MobiDBLite consensus disorder prediction 374 445 - -
Lapu3g03412 631 Pfam Autophagy-related protein 13 19 259 IPR018731 GO:0006914|GO:1990316
Lapu3g03412 631 Gene3D HORMA domain 11 263 IPR036570 -
Lapu3g03412 631 MobiDBLite consensus disorder prediction 557 578 - -
Lapu3g03412 631 FunFam Autophagy-related protein 13b 13 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g03412 Lapu-Chr3 57341462 57346946 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g03412 K08331 - gmx:100798585 984.556
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g03412 3 57341462 57346946 Lapu3g03412 3 57341462 57346946 ECH