Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03386 ATGTCTTCTGCAACCAAGGCTGACAGGAAGACTGCAATCGATGTGGCGTCGTGGATGTTCAATATAGTCACATCTGTGGGGATAATCCTCGTGAATAAAGCCCTCATGGCTACATATGGTTTCAGCTTTGCAACAACGTTAACTGGTTTGCATTTTGCAACCACTACCTTGCTGACAGTCTTTCTTAAGTGGCTGGGATATATCCAAACCTCTCATCTTCCCTTACCCGATCTTATCAAATTTGTCTTATTTGCAAATTTCTCTATCGTGGGAATGAATGTGAGTTTGATGTGGAACTCTGTCGGTTTCTATCAGATTGCTAAGCTGAGTATGATTCCGGTATCTTGTTTCCTGGAAGTTATATTGGACAACGTGCGATATTCAAGGGACACAAAGCTTAGCATTTCTCTAGTTCTCCTTGGTGTGGCTGTATGTACTGTCACTGATGTGAGCGTCAATGCTAAGGGTTTCATAGCTGCTGCAGTTGCAGTTTGGAGCACCTCACTGCAGCAGTATTATGTGCATTTTCTTCAGCGGAAGTATTCTCTTGGATCGTTTAACTTGTTAGGTCACACTGCACCAGTACAGGCCGCAAGTTTACTGCTAGTAGGTCCCTTTGTGGACTATTGGTTGACAAACAAACGAGTTGATGCCTACAACTATGGTTTGACATCCACTTTGTTGATCGTTATCTCTTGCACCATCGCAGTAGGGACAAACCTGAGCCAATTCATCTGCATTGGCAGGTTCACAGCAGTATCCTTCCAAGTGCTTGGTCACATGAAGACAATTCTGGTGCTGGCCCTAGGATTCGTTTTCTTTGGAAAAGAAGGTCTGAATTTACAAGTGATTCTGGGCATGCTCATTGCAATAGGTGGAATGATTTGGTATGGCAATGCATCTTCTAAGCCAGAAGGGAAGGAGCGTCACAGCTTACCCATTAATTCTACCCCTAAGACACAAGACTATAATGTTCTACCAGTATCTTCTGAAACGGATCAGTAA 1005 0.4348 MSSATKADRKTAIDVASWMFNIVTSVGIILVNKALMATYGFSFATTLTGLHFATTTLLTVFLKWLGYIQTSHLPLPDLIKFVLFANFSIVGMNVSLMWNSVGFYQIAKLSMIPVSCFLEVILDNVRYSRDTKLSISLVLLGVAVCTVTDVSVNAKGFIAAAVAVWSTSLQQYYVHFLQRKYSLGSFNLLGHTAPVQAASLLLVGPFVDYWLTNKRVDAYNYGLTSTLLIVISCTIAVGTNLSQFICIGRFTAVSFQVLGHMKTILVLALGFVFFGKEGLNLQVILGMLIAIGGMIWYGNASSKPEGKERHSLPINSTPKTQDYNVLPVSSETDQ* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03386 334 MobiDBLite consensus disorder prediction 307 334 - -
Lapu3g03386 334 PANTHER SOLUTE CARRIER FAMILY 35 17 301 - -
Lapu3g03386 334 Pfam Triose-phosphate Transporter family 23 297 IPR004853 -
Lapu3g03386 334 MobiDBLite consensus disorder prediction 313 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g03386 Lapu-Chr3 57121152 57125834 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g03386 24 303 Organic Solute Cotransporters AT3G10290 25.424 5.60e-12 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g03386 K26224 - gmx:100814890 612.838
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g03386 3 57121152 57125834 Lapu3g03386 3 57121152 57125834 ECH
Lapu3g03386 3 57121152 57125834 Lapu9g01175 9 25386632 25392303 ECH
Lapu3g03386 3 57121152 57125834 Lapu9g01205 9 25859133 25863978 PCT