Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03278 ATGTCAGAAAAATGGATAGTATTTATGTTATGGCTTGTAATTTCGACAACACTGGTGCAGAGTAATGTGATTGGTGGAAATGAAAGAAGAGAAAGCAATTTCAGAGCCATATTCAACTTCGGAGACTCCAATTCTGACACAGGCGGTCTCTCAGCGGCGTTCGGACAAGCTCCTCCTCCCAACGGAATCACTTTTTTCCACTCTCCAAACGGACGATTCTCCGATGGCCGCCTCATAATCGATTTTATTGCGAAGAGCTTGTGCTTGCCTTATCTGAGTGCTTACTTGGACTCGGTGGGGTCCAATTTCAGCCACGGAGCGAATTTCGCCACGGCGGGATCCACCGTCAGACCTCAGAACACAACTAGGTCTCAGAGCGGATACAGTCCCATTTCCCTAGATGTTCAGTTCCAGCAATTCTCTGATTTCAAAACCAGATCCAAATTCGTTCGCCAACAAGGAGGGGTGTTTAAGGAATTGTTGCCCAAGGAGGAGTATTTTTCTGAGGCTCTATATACCTTTGATATTGGACAAAATGATCTCACAGCAGGCTACAAACTCAACTTCACCACACAACAAGTCAAGGCCTATATTCCTGATGTATTAGGCCAGTTCTCCAGAGTCATAAAGGGTGTGTATGGGGAAGGTGGAAGGTGGTTTTGGATACACAACACAGGCCCATTGGGATGCTTGCCATACATGCTGGATCGCTATCCCATGAGCCCAGCCCAAAGGGACGAGTTTGGGTGTGCCAAACCATTCAATGAGGTGGCCCAATATTTTAATAAAAAATTAAAAGAAACTGTTGAAAAACTGAGGGAAGAATTGCCGAAGGCCAAAATCACCTATGTTGATGTGTATAGGGTGAAGTACAACCTCATCAGCCATGCCCAGAAATATGGTTTTGAGAAGGGGGTGATAGCATGCTGTGGACACGGTGGGAAATACAACTTCAACAATGGAGAGAGATGTGGAGCAAGCAAGAGAGTGAATGGGAAAGAGATTGTGATTGCCAAATCTTGCAAAGATCCAAGTTTGAGGATTATTTGGGATGGAATCCATTACACCGAAGCTGCTAATAATTGGATCTTCCTACAAATAGTCAATGGCTCATTTTCAGATCCACCTACGCCATTACGAGGTACAAATTTACGTTCTTGCAAGAGCCAATTTTGA 1176 0.4464 MSEKWIVFMLWLVISTTLVQSNVIGGNERRESNFRAIFNFGDSNSDTGGLSAAFGQAPPPNGITFFHSPNGRFSDGRLIIDFIAKSLCLPYLSAYLDSVGSNFSHGANFATAGSTVRPQNTTRSQSGYSPISLDVQFQQFSDFKTRSKFVRQQGGVFKELLPKEEYFSEALYTFDIGQNDLTAGYKLNFTTQQVKAYIPDVLGQFSRVIKGVYGEGGRWFWIHNTGPLGCLPYMLDRYPMSPAQRDEFGCAKPFNEVAQYFNKKLKETVEKLREELPKAKITYVDVYRVKYNLISHAQKYGFEKGVIACCGHGGKYNFNNGERCGASKRVNGKEIVIAKSCKDPSLRIIWDGIHYTEAANNWIFLQIVNGSFSDPPTPLRGTNLRSCKSQF* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03278 391 Coils Coil 262 282 - -
Lapu3g03278 391 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 9 376 - -
Lapu3g03278 391 CDD SGNH_plant_lipase_like 36 371 IPR035669 -
Lapu3g03278 391 Gene3D SGNH hydrolase 26 371 IPR036514 -
Lapu3g03278 391 Pfam GDSL-like Lipase/Acylhydrolase 37 364 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g03278 Lapu-Chr3 56006938 56009327 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g03278 36 386 Acyl Lipid Metabolism Gene Families AT4G10950 30.137 9.52e-33 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g03278 - - var:108335696 715.687
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g03278 3 56006938 56009327 Lapu3g03278 3 56006938 56009327 ECH