Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g02881 ATGGAGGAGGTGGAGCGGGTGAAAGCGGAGGCAGTGCAGATAATGGGAGTGTTTCATCTGCTCCCGAGGCTCGTCGTCTTCGATCTCGATTACACTCTTTGGCCTTTCTACTGTGAGTGCCGCTCCAAGCACGACACGCCTTCTTTGTTTCCTCATTCTAGAGGCATTTTGCACGCACTCAAACACCACAACATTCATGCTGCAATTGCTTCTAAGTCACCAACTCCTGACATTGCAACTACGTATCTCGACAAACTCGGCATCAGGTCAATGTTTGTCGCCGAGGAAATATTTTACAGCTGGACACACAAAACAGATCATTTTCAGAAAATTCATTCGAAGACTGGGGTCCCATATAACTCCATGCTATTCTTTGACGATGATAATAATAACATCCAGGAGATCTCAAAAATTGGTGTAACAAGTATTTTGGTTAGAAATGGGGTAAGTCTTGAAGCATTTAGAAACGGCCTGGCAAAATTTTCTGAAAACGGGAATGCATCAAAGAAGAACAAGCAGAAAAGGCCCAAGTAA 534 0.4401 MEEVERVKAEAVQIMGVFHLLPRLVVFDLDYTLWPFYCECRSKHDTPSLFPHSRGILHALKHHNIHAAIASKSPTPDIATTYLDKLGIRSMFVAEEIFYSWTHKTDHFQKIHSKTGVPYNSMLFFDDDNNNIQEISKIGVTSILVRNGVSLEAFRNGLAKFSENGNASKKNKQKRPK* 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g02881 177 PANTHER MAGNESIUM-DEPENDENT PHOSPHATASE 1 MDP1 1 171 IPR010036 GO:0016791
Lapu3g02881 177 SUPERFAMILY HAD-like 23 153 IPR036412 -
Lapu3g02881 177 Gene3D - 8 167 IPR023214 -
Lapu3g02881 177 SFLD C1.5.2: MDP Like 5 169 - -
Lapu3g02881 177 NCBIfam HAD-IIIC family phosphatase 24 138 IPR010033 -
Lapu3g02881 177 SFLD Haloacid Dehalogenase 5 169 - -
Lapu3g02881 177 FunFam Magnesium-dependent phosphatase 1 7 167 - -
Lapu3g02881 177 Pfam Acid Phosphatase 21 163 IPR010036 GO:0016791
Lapu3g02881 177 CDD HAD_MDP-1_like 22 145 IPR035679 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g02881 Lapu-Chr3 51799054 51801471 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g02881 K17619 - gmx:100795199 306.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g02881 3 51799054 51801471 Lapu3g02881 3 51799054 51801471 ECH
Lapu3g02881 3 51799054 51801471 Lapu6g01104 6 11030842 11032036 PCT