Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g02857 ATGAGGAGATTAAAAAGATTAACCGAAGCAAATGCAATAACCGCATATTGCAGCATATCTTCAATCGTAAAATTGCACAGGATCCTCTTCTATCATCATCAGAGAAATTTGATGTTTCTACGACAATGTTCACATTGTGAGAACAAAATGGCAAGTAGACAAGAAAAATGCATCCACTGTGGAATTGTACTGGCAGTGCCTGCAGAGGTGAATGTCTTTGAGTGTGGAGTGTGCCATGGCATCACCCAGATTAGACCCTCCACAGGTTCATGGACTCAAGCCCACAACTCCTTTCATAGTTTCACAGGTCGTTTTAGAGGGTTTTTGAATACCATAAGGAGTAGTTCAGTTAACAGCAATTCTGGTGGTTATTATGGAGCAAATAGTTTTGGTTTTAATCCTCAGCCTCAGTCACTAAGGCCATCATTTCATGTGTATGGCCCAAAGCGAGCTGTGGTGTGTGGAATTCGCTACCATGGGAAGAGATACAAGCTCAAAGGCACTGTCAATGATGCAAAATGCATGAAATACTTTCTCATTAAGGAATTTGGGTTTCCTCGTGACTCCATTCTCATGCTCACAGATGATAAGGAGGAGAGAAACCCGCTAAGGATCCCGACCAGATATAACATTGCAATGGCCATGAGGTGGCTGCTTGAGAATAGCCGCTCAGGGGATTCACTGTTGTTCCATTTCTCTGGACATGGCACTCAGGAACTCAACATGGACGGGAACGAAATCGATGGGTTTGATGAAGCAATATGCCCCGTTGATTACGAAGAGCAAGGGAAGATACTCGATGATGAGATCAACACTGCAATTGTTAGGCCCTTACCACCTGGAGCTAAACTTCATGCCATTGTCGATGCATGCCATAGTGGGACTGTTCTTGATTTATCTTTTGTCTGCAAGATGAACAGGGAAGGGTATTACTCATGGGAAGATCAAAGATTTCCCAGAGTTAACAAAGGTACAAGTGGAGGGCTAGCAATTTGTATTTCAGCTTGTGAGGATGGTCAAACCTCCATAGATACCTCTGCCTTAAGCGGCACTGAAGCTACTGGTGCTTTGACCTATAGTTTCATCCAAACGGTGCAAAACGAACCTGGTCTGAGTTATGGTCGCTTGCTGAGTGCCATGCGTTCAACCATTCGTGGGACAAAAACAAGCGTAGTGCCATTAAATGGTCCAATTGCTTCGCTGTTCAACAGACTTCTTTGCATGGAACTTAGACAAGAGCCACAACTATCGTCTTCCGAGGTGTTTGACGTGTATGCAAGTCGTTTTGTACTGTGA 1296 0.4398 MRRLKRLTEANAITAYCSISSIVKLHRILFYHHQRNLMFLRQCSHCENKMASRQEKCIHCGIVLAVPAEVNVFECGVCHGITQIRPSTGSWTQAHNSFHSFTGRFRGFLNTIRSSSVNSNSGGYYGANSFGFNPQPQSLRPSFHVYGPKRAVVCGIRYHGKRYKLKGTVNDAKCMKYFLIKEFGFPRDSILMLTDDKEERNPLRIPTRYNIAMAMRWLLENSRSGDSLLFHFSGHGTQELNMDGNEIDGFDEAICPVDYEEQGKILDDEINTAIVRPLPPGAKLHAIVDACHSGTVLDLSFVCKMNREGYYSWEDQRFPRVNKGTSGGLAICISACEDGQTSIDTSALSGTEATGALTYSFIQTVQNEPGLSYGRLLSAMRSTIRGTKTSVVPLNGPIASLFNRLLCMELRQEPQLSSSEVFDVYASRFVL* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g02857 431 Gene3D - 113 431 - -
Lapu3g02857 431 PANTHER METACASPASE-4 146 426 - -
Lapu3g02857 431 Pfam Caspase domain 149 423 IPR011600 GO:0004197|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g02857 Lapu-Chr3 51454641 51462413 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g02857 K22684 - gmx:100783197 630.557
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g02857 3 51454641 51462413 Lapu3g02857 3 51454641 51462413 ECH