Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g02688 ATGTTGACTTCTGCATCATCCTCCATCTTCTCCTTCATCCCCTCCATAAAGCCCTCACATTCTTATCGCTTCACCGTCCAGGCTCACTCAAAACCCCCTACTCTTCCCAACCTCAAAGCCCTCGCCGGCGCCGCAGTCTTCGCCGCCGTCGCGCTCCAATTCCCCTCGGCGCGCGCCTCACCTCCGCCTCCGACCCCTATCCAAACGGACCACCACCACGAAGAATCCCTCTCGCCGCTCTCAGACCTCCTCGAAACGAACGCCGAGGCCCTTGCCGCCCTCAAGTCCCTCCTCCAGCAGAAGCTCGAGCTCGGCGAGGACGATGAGGCGCTCGCCATCCTGAAGCGCCTAATCGCCGCGCAGCCGGATGCCGTCGACTGGAAGTTCCTCGCTGCGCGCCTCGCTGCCGAGACCGGCGACGCCGACGCTGCGCGCGCGTACTACGAGGAAGTCCTGGCGGCGAACCCGCTCTCGTTCGAGGCGCTGTTCGAGAACGCACTGCTGATGGACCGGTCAGGGGAAGGGGAGGCGGCTATGCGGCGGCTGGAGGAGGCGCTGCGCGTGGCCGAGGAGGAGAACAAGAGGAAGGAGGCGAGAGACGTGAGGCTGATCATGGCGCAGATCATGTTTCTGCAGAAGAATGTGGATGAAGCGTTAGGGATTTATGATGAGCTGACGAAAGAGGATTCGAGGGATTTCAGACCTTACTTTTGCAGAGGCATGATTTATAGCTTGCTTGATAGGAATGACGAGGCGAAGGAGCAGTTTGCAAAATACCGAGAGTTGAGTCCCAAGAAATTTGAGGTGGATGGGTATTTGAGAACCCCTTTGTCAAGGATGAAGCTATTTAGCACGGATGAGAGCTGA 867 0.5882 MLTSASSSIFSFIPSIKPSHSYRFTVQAHSKPPTLPNLKALAGAAVFAAVALQFPSARASPPPPTPIQTDHHHEESLSPLSDLLETNAEALAALKSLLQQKLELGEDDEALAILKRLIAAQPDAVDWKFLAARLAAETGDADAARAYYEEVLAANPLSFEALFENALLMDRSGEGEAAMRRLEEALRVAEEENKRKEARDVRLIMAQIMFLQKNVDEALGIYDELTKEDSRDFRPYFCRGMIYSLLDRNDEAKEQFAKYRELSPKKFEVDGYLRTPLSRMKLFSTDES* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g02688 288 Pfam Tetratricopeptide repeat 129 156 IPR019734 GO:0005515
Lapu3g02688 288 Pfam Tetratricopeptide repeat 236 265 IPR019734 GO:0005515
Lapu3g02688 288 SUPERFAMILY TPR-like 89 266 IPR011990 GO:0005515
Lapu3g02688 288 Coils Coil 208 228 - -
Lapu3g02688 288 Pfam Tetratricopeptide repeat 200 228 IPR019734 GO:0005515
Lapu3g02688 288 Coils Coil 80 100 - -
Lapu3g02688 288 Coils Coil 172 199 - -
Lapu3g02688 288 Gene3D Tetratricopeptide repeat domain 68 279 IPR011990 GO:0005515
Lapu3g02688 288 PANTHER TRANSMEMBRANE PROTEIN 10 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g02688 Lapu-Chr3 49525840 49526706 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g02688 - - gmx:100808986 387.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g02688 3 49525840 49526706 Lapu3g02688 3 49525840 49526706 ECH