Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g02604 ATGGCGTTGAATTTCTCGCATCGACCGATTTTTTCTGAGGATAATTTGGTTTCGTCGATGAGGATGGGGATTCCAGAGAAGAGTGGTGTTGATAATTGCTTTGATTATGGAAGAGATAGGTGTGATAGGGGAGGTGGTGGTGCGAGTCACGATGACATTGTCGATCTTTTGCCTTCGGATCCCTTCGGCATGGACATCAGCACCACCTTCACGGCCATCACTGGGTGGCTTGAGGATTTGGAGGATTATGGTGGATATAGAAGGGATGAGCTTGGGGCGAATGATGACAATTACCAGCTTTTTGCTGGGCTGAATTTCATTTGGAACAATGCTATGAGGTTCCATGCGTGTGTTGAGGAGAATATGGGGTTTGTCGAGTGTAGTTCTGTGAGTGATGATGGAGCTGCTGCTGCATCGAGCAATTTTGGGGTTGGATCTGCTTCTGATGCTGATATGTCGGGTTTTCCCGCCACTAGCGGGTCAGGTGATGTTGTGAGACGGGGTGGAGGAGGGAGTGCAGGTGATGAGCTTGGAGGAGGAGGTGGGGGTGATGAGTCTGGTCCTCACCCTGCCTTGAGTTTTTCTCTTGGTTATCTGGGGTTGTCCGATCTTCTTGTTGTTGAAAGAGTTTGTAAATCTCTGCATTCCACGGTTCATGATGATCCACTTTTGTGGAGGAGTATCCACGTGGATCAGCCTTTGAATGAGAGGATAACTGATGATGTTCTTTTCCGATTGGCTAACAGGGCTCAAGGTAATCTTCATTGCTTGAGCCTTGTTGAATGTACCAGGATAACTGATGATGGTTTGAGGCGGGTTCTTGAAAGCAATCCCAAATTAACCAAGATGAGTGTTCCTGGATGTACAAGACTCAGTATTGAGGGCATTGTGGGTATGCTAAAAGCCTACAACTCTGTGGGTCCCCAAGGGGTGAAGCATTTACACATAGGTGGTCTTTATGGTGTTACACAGAAGCATTTTGAAGAGTTGAGGTTCTTGTTGGGTGCTGATAGCCAGCAGCAGATGCAGCACTCTCACAAACCACACTTCTATCGCAGGGGAAATTTGTATCTGTCCTGTTATGATGATCGAGCCATGGATATCGAAGTTTGTCCACGATGCCAGAATTTGAGGCTTGTGTATGATTGTCCGGCAGAGAGTTGTCAAGGGATGGGACACACCACTCAGACGTGCAGGGCATGCACTCTATGCATACCCCGGTGTAGTCAGTGTGGCCACTGTATCAATGACAGTGAATACGAGGAAACATTTTGTCTGGAGTTGCTTTGCTCTTCTTGTTCGAAGCAGCTAGTCAAATGTTCAGATGGAAAGGCTGGACCAGCTAAGTCGGTTATTATTCATGAACAAAGCTAG 1374 0.4716 MALNFSHRPIFSEDNLVSSMRMGIPEKSGVDNCFDYGRDRCDRGGGGASHDDIVDLLPSDPFGMDISTTFTAITGWLEDLEDYGGYRRDELGANDDNYQLFAGLNFIWNNAMRFHACVEENMGFVECSSVSDDGAAAASSNFGVGSASDADMSGFPATSGSGDVVRRGGGGSAGDELGGGGGGDESGPHPALSFSLGYLGLSDLLVVERVCKSLHSTVHDDPLLWRSIHVDQPLNERITDDVLFRLANRAQGNLHCLSLVECTRITDDGLRRVLESNPKLTKMSVPGCTRLSIEGIVGMLKAYNSVGPQGVKHLHIGGLYGVTQKHFEELRFLLGADSQQQMQHSHKPHFYRRGNLYLSCYDDRAMDIEVCPRCQNLRLVYDCPAESCQGMGHTTQTCRACTLCIPRCSQCGHCINDSEYEETFCLELLCSSCSKQLVKCSDGKAGPAKSVIIHEQS* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g02604 457 SUPERFAMILY F-box domain 196 229 IPR036047 GO:0005515
Lapu3g02604 457 Gene3D Ribonuclease Inhibitor 194 412 IPR032675 -
Lapu3g02604 457 MobiDBLite consensus disorder prediction 158 186 - -
Lapu3g02604 457 SUPERFAMILY RNI-like 236 324 - -
Lapu3g02604 457 PANTHER MITOCHONDRIAL ATP SYNTHASE COUPLING FACTOR B 98 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g02604 Lapu-Chr3 48393004 48396887 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g02604 - - gmx:100807460 714.916
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g02604 3 48393004 48396887 Lapu3g02604 3 48393004 48396887 ECH