Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g02585 ATGCATTTTGATGATGCATATGGAGCTTATTTTGATTTTGGGAATCATACAGAAAAGGTTAAACTTAAATGGAAAGATGTGGAGATAGGACACAATCATGCTGATCGCCAACTTGTCAGGGATGTTTTGGAGAGGCCTGTATTGAGATTGGTTCCTCACATTGGTTATGTTAGTTTATTCCCATTCATGGGGAAGATCATTCCATCTGGATCATGGATTCTGGAAAAGCAGCTGGAACTCATTTCAAATCACAGCCTCTTTTGGACTGACCATGGACTACGATCGCTTGCCACGACGAGCTCCTTGTATATGAAATTCAACTCAGAGTCCGAGGGTCCATACTGGAGAGGTCAAATTTGGATAAACATGAATTACAGAATTCTTTCAGCGCTCCACCATTACTCCAAAGAGAATGGACCATATCAGGACAGAGCCAAAGTTATCTACAAAGAATTGAGAAGCAATTTAATCAGAAATATAGTACGCAATTATCAAGAGACTGGATTTTTATGGGAATAG 519 0.3969 MHFDDAYGAYFDFGNHTEKVKLKWKDVEIGHNHADRQLVRDVLERPVLRLVPHIGYVSLFPFMGKIIPSGSWILEKQLELISNHSLFWTDHGLRSLATTSSLYMKFNSESEGPYWRGQIWINMNYRILSALHHYSKENGPYQDRAKVIYKELRSNLIRNIVRNYQETGFLWE* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g02585 172 Gene3D - 1 172 IPR012341 GO:0005975
Lapu3g02585 172 SUPERFAMILY Six-hairpin glycosidases 2 172 IPR008928 GO:0005975
Lapu3g02585 172 PANTHER MANNOSYL-OLIGOSACCHARIDE GLUCOSIDASE 1 172 IPR004888 GO:0004573|GO:0009311
Lapu3g02585 172 Pfam Glycosyl hydrolase family 63 C-terminal domain 1 172 IPR031335 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g02585 Lapu-Chr3 48164852 48178795 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g02585 1 172 Glycoside Hydrolase AT1G67490 65.698 3.46e-77 243
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g02585 K01228 - gmx:100795161 339.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g02585 3 48164852 48178795 Lapu3g02585 3 48164852 48178795 ECH