Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g02570 ATGCAAGGGAGCGAGAGGACGAAGAACCGATGGCTCGTGTGGCTATTGGCCACGTTGGGCATAATCGGAGCCACGCTCTTCATCGCCACTTTCATCCAAACCTCCGAGAACAGTCTTCTATGCTCAATAACCAGAACGCAGCAGCAACAGCAGTTAACCCAAAGTCCCACATCGATGCAGCTCAGAGCGATACTTCACTATGCCACCTCGCCGATTGTCCCGCAGCAGTCTCTTTCGGAGATCACTGTCACCTTCGACGTGCTCCAGGCCCTTCACCGCCCTGCCAACTTCCTCATCTTTGGGCTGGGCCACGACTCCCTCATGTGGGCCGGCCTCAACCCAGGCGGCACCACGCTCTTCCTCGAGGAGGACCCTAAGTGGTTCCAGACCGTCATCAAGGACGCGCCGGGCCTCCGTGCCCACACCGTCCGCTACCGAACCCAGCTCCGCGACGCCGACCACCTCCTCTCGACTTACCGCTCCGAGCCCGCCTGCTCGCCGGGCACCGCCACGCTCCGCGGCAACGAGCGGTGCAAGCTGGCGCTCCAGAACCTCCCCGACGAGGTGTACTCGACGGAGTGGGATCTGATAATGATCGATGCGCCGAAGGGGTACTTTGCGGAGGCGCCAGGGCGCATGGCGGCGATCTTCTCAGCGGCGGTGATGGCGAGGGACAGGAAAGGGTCCGGCGTGACGCACGTGTTCCTGCACGATGTGGATCGGAAGGTGGAGAAGGTTTACGCGGAGGAGTTTCTCTGCCGGAAGCAGTTGGTGGACGGTGGCGATGATGATGGCTCCGTCGTACTCTACCGACACACGAGAAACTTGTGGGTTGTGTTGTTACTTTTTGGTTTGGCTTCTGCTAAAACCTCATTTACTCATTTACTCTAA 891 0.5948 MQGSERTKNRWLVWLLATLGIIGATLFIATFIQTSENSLLCSITRTQQQQQLTQSPTSMQLRAILHYATSPIVPQQSLSEITVTFDVLQALHRPANFLIFGLGHDSLMWAGLNPGGTTLFLEEDPKWFQTVIKDAPGLRAHTVRYRTQLRDADHLLSTYRSEPACSPGTATLRGNERCKLALQNLPDEVYSTEWDLIMIDAPKGYFAEAPGRMAAIFSAAVMARDRKGSGVTHVFLHDVDRKVEKVYAEEFLCRKQLVDGGDDDGSVVLYRHTRNLWVVLLLFGLASAKTSFTHLL* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g02570 296 PANTHER OS11G0490100 PROTEIN 12 260 IPR006514 GO:0045492
Lapu3g02570 296 Pfam Polysaccharide biosynthesis 80 259 - -
Lapu3g02570 296 Gene3D Vaccinia Virus protein VP39 77 262 IPR029063 -
Lapu3g02570 296 NCBIfam TIGR01627 domain 61 262 IPR006514 GO:0045492
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g02570 Lapu-Chr3 47973735 47975229 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g02570 - - pvu:PHAVU_002G173400g 452.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g02570 3 47973735 47975229 Lapu3g02570 3 47973735 47975229 ECH