Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g02565 ATGGATCCAGACTCGTTGGCAAAGGCATTCGTGGAGCACTACTACTCCACCTTCGATTCCAACAGAGCCACCTTGGCCAATCTCTACCAGGACGGTTCCATGCTCACCTTCGAAGGCCAGAAGATCCAGGGCGCTTCCAACATCGTCGCCAAGCTCACTTCCCTCCCTTTCCAGCAGTGCCACCACTCCATCTCCACCGTCGACTGTCAACCTTCCGGTGTCAACGCCGGTATGCTCGTCTTTGTCAGCGGCAACCTCCAGCTCTCCGGCGAACAGCACGCTCTCAAATTCAGCCAGATGTTCCATTTGATCCCAACTCCGCAGGGAAGCTATTATGTGTTGAATGACATATTCCGCTTGAACTATGCATGA 372 0.5376 MDPDSLAKAFVEHYYSTFDSNRATLANLYQDGSMLTFEGQKIQGASNIVAKLTSLPFQQCHHSISTVDCQPSGVNAGMLVFVSGNLQLSGEQHALKFSQMFHLIPTPQGSYYVLNDIFRLNYA* 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g02565 123 Gene3D - 1 123 - -
Lapu3g02565 123 SUPERFAMILY NTF2-like 3 121 IPR032710 -
Lapu3g02565 123 ProSiteProfiles Nuclear transport factor 2 domain profile. 6 120 IPR018222 -
Lapu3g02565 123 Pfam Nuclear transport factor 2 (NTF2) domain 7 120 IPR002075 -
Lapu3g02565 123 PANTHER NUCLEAR TRANSPORT FACTOR 2 2 122 IPR045875 GO:0006913
Lapu3g02565 123 CDD NTF2 2 122 IPR018222 -
Lapu3g02565 123 FunFam Nuclear transport factor 2 1 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g02565 Lapu-Chr3 47887619 47890125 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g02565 - - gmx:100777334 240.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g02565 3 47887619 47890125 Lapu3g02565 3 47887619 47890125 ECH
Lapu6g00064 6 523477 525687 Lapu3g02565 3 47887619 47890125 PCT