Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g02556 ATGATGGCGGTGGAGAAGGGTGTTGAGATGGTGGCATTGGAGTGTCTGGGGAAAGGGTTCGATATGGCCAGTGATTTTCGGTTGAGGTTTGCAAAGGGGATTCGTGGAGGGAGGTTGGTGGTACTTGATGAACATAACAAGAGGGATATCTTGATTCCTGGAACTGGAGGAGTTACCATTAAAGCGGTTTCTGAGAATATTCGGTGTGATAAAGGGGATAGAATACGCTTCAAGTCTGATGTACTTGAATTCAACCAGATGTCTGAGTTGCTTAATCAGAAATCGGCAGTGCAAGGGAAAGTTCCTTCTGGGTATTTTAATGCGCTTTTTGATTTGACTGGTGATTGGTTTCGTGATGCTGCTGACACAAAATACCTTGCTTTTGATGGGTATTTCATTTCACTCTACTATTTGCACCTCACTGCTTCTCCACTCATACTGCAAGAAGAGGTAAAGAAGTCTGTTCCGGCTCAGTGGGATCCAGCTTCATTATCTAGGTTCATACAGACATATGGTACACACATAATAGTGGGTATGGCTGTGGGAGGTCAAGATGTGATCTGTGTCAAACAAAAACATTCATCAAAAATTCCTCCTGGTGATCTCAGGAGACATTTAGAGGATCTTGGAGATTTTCTTTTCTCAGATGTGAGAAGCCCTTCTTTACTACAGGGGAAGACGGCAGATGGAAAACAGAAGGTTCCTGAGGTCTTTAACCGTGTGATGCAATCAAACACAATGCAGTTCACCAGTATTTCAGAAACATCAAGCAAGGATGGCCTCACTATTATTTGTTCAAAAAGAGGAGGGGATATGTTCAAACACAGTCACTCAAATTGGCTTCAGACAGTGCCTTCTAACCCTGAAGCAATCCTCTTCAAGTTTGTTCCTATTTCCTCACTTCTGACAGGAATTCCTGGAAGTGGATATCTTAGTCATGCAATCAATCTGTATCTACGCTATAAGCCTTCTCCCGATGATTTGCAGTATTTTTTGGAGTTTCAAATTCCAAGGCAATGGGCGCCCATGTTTTGCGAGCTGCCACTCAGGCATCAGCGGAGAAAGACTGCTTCCCCTTCATTGCAATTTAGTTTCATGGGTCCGAAGCTTCATATCATCTCTACACAGGTGGTAAGTGAACAAAAACCTGTGGTTGGCATGCGCTTGTACTTGGAGGGAAGGAAATGTGATAGACTTGCTTTGCATATCCAACATCTTTCAAGCCTCCCAAATAAAATGATCCCCTCTTCAAGAACCTCAACCTCGAGCATGTGGCGAGGATCTGATGATAATGATTCGAGTGATCAATTTCTGGAACGAATAAGATGGAAGAGATTCTCAAATGTGTGCACAGCAGTGGTTAAACATGACCCTAACTGGTTGAATAGTTCTGGAGGTGTTTATATTGTTACAGGTGCACAGCTCCTTAGCAAAGGGAGTTGGCCAAGGAATGTGCTTCACCTGCGTCTTCTCTTCACTCATATACCCAATTGCAGTATCCGGAAGTTAGAGTGGTCTGCTGCACCAGAGGCTTCAAGAAAAACATCTTTTCTCACAAATTTGAGCACAACATTTTCATTCACACAGCATGGCAACACTGGTCCTCCAAAGCAAGCTCCAACTGCACTCAATTCTGGAATTTATCCAGACGGTCCACCTGTGCCAGTTCGCTCTGGTAAACTACTTAAATACGTGGAGACAGCTGAGGTTGTGCGAGGTCCACATGATGCTCCTGGCCATTGGTTGGTAACTGCTGCTAAGCTTGTGACTGATGGTGGTAAGATTGGATTACAGGTGAAGTTTGCATTGCTAGATTATTGGTGA 1824 0.4386 MMAVEKGVEMVALECLGKGFDMASDFRLRFAKGIRGGRLVVLDEHNKRDILIPGTGGVTIKAVSENIRCDKGDRIRFKSDVLEFNQMSELLNQKSAVQGKVPSGYFNALFDLTGDWFRDAADTKYLAFDGYFISLYYLHLTASPLILQEEVKKSVPAQWDPASLSRFIQTYGTHIIVGMAVGGQDVICVKQKHSSKIPPGDLRRHLEDLGDFLFSDVRSPSLLQGKTADGKQKVPEVFNRVMQSNTMQFTSISETSSKDGLTIICSKRGGDMFKHSHSNWLQTVPSNPEAILFKFVPISSLLTGIPGSGYLSHAINLYLRYKPSPDDLQYFLEFQIPRQWAPMFCELPLRHQRRKTASPSLQFSFMGPKLHIISTQVVSEQKPVVGMRLYLEGRKCDRLALHIQHLSSLPNKMIPSSRTSTSSMWRGSDDNDSSDQFLERIRWKRFSNVCTAVVKHDPNWLNSSGGVYIVTGAQLLSKGSWPRNVLHLRLLFTHIPNCSIRKLEWSAAPEASRKTSFLTNLSTTFSFTQHGNTGPPKQAPTALNSGIYPDGPPVPVRSGKLLKYVETAEVVRGPHDAPGHWLVTAAKLVTDGGKIGLQVKFALLDYW* 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g02556 607 PANTHER MACPF DOMAIN-CONTAINING PROTEIN CAD1 8 606 IPR044663 GO:0006952|GO:0012501|GO:2000031
Lapu3g02556 607 SMART MACPF_8 123 320 IPR020864 -
Lapu3g02556 607 ProSiteProfiles Membrane attack complex/perforin (MACPF) domain profile. 1 332 IPR020864 -
Lapu3g02556 607 Pfam MAC/Perforin domain 106 318 IPR020864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g02556 Lapu-Chr3 47739612 47745184 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g02556 - - gmx:100781070 1165.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g02556 3 47739612 47745184 Lapu3g02556 3 47739612 47745184 ECH